Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0812 |
Symbol | |
ID | 4618321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 729462 |
End bp | 729866 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639783907 |
Product | hypothetical protein |
Protein accession | YP_930331 |
Protein GI | 119872324 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.553396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000113363 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACACG AGTCAGTGCC AATATACTGG AGAAATATCC CTCATTACTA TCGTCTTGTA GCTAAGAGAT GTAAAAAATG TGGCGCAGTT TACTTTCCGC CAGTTATAAA ATGCCGATGT GGTTCTAAGG AGTTGGAAGA CTTTGAACTT CCGCATGAGG GAAAACTCGT GGAGTTTACA GTATTGTATC AGGTTGGCAC AGATTTTCTC AAACAAAAGC CCTTAGTAAT AGGGCTTGTC GAACTTTCTA ATGGCGTTAA GGTAGTAGGC CAGATAGTAG ATGTTCAGCC GGAAAAGCTC ACGCAAGGAG CGAAAGTAGA AGCTGTATTT CGTAGGGTTA TGGTAGATGG AAAATATGGG CTTGTCATGT ATGGTTATAA GTTTAGGCCA GTTGATGGGG TATGA
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Protein sequence | MKHESVPIYW RNIPHYYRLV AKRCKKCGAV YFPPVIKCRC GSKELEDFEL PHEGKLVEFT VLYQVGTDFL KQKPLVIGLV ELSNGVKVVG QIVDVQPEKL TQGAKVEAVF RRVMVDGKYG LVMYGYKFRP VDGV
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