Gene Pisl_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0812 
Symbol 
ID4618321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp729462 
End bp729866 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content42% 
IMG OID639783907 
Producthypothetical protein 
Protein accessionYP_930331 
Protein GI119872324 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.553396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000113363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACACG AGTCAGTGCC AATATACTGG AGAAATATCC CTCATTACTA TCGTCTTGTA 
GCTAAGAGAT GTAAAAAATG TGGCGCAGTT TACTTTCCGC CAGTTATAAA ATGCCGATGT
GGTTCTAAGG AGTTGGAAGA CTTTGAACTT CCGCATGAGG GAAAACTCGT GGAGTTTACA
GTATTGTATC AGGTTGGCAC AGATTTTCTC AAACAAAAGC CCTTAGTAAT AGGGCTTGTC
GAACTTTCTA ATGGCGTTAA GGTAGTAGGC CAGATAGTAG ATGTTCAGCC GGAAAAGCTC
ACGCAAGGAG CGAAAGTAGA AGCTGTATTT CGTAGGGTTA TGGTAGATGG AAAATATGGG
CTTGTCATGT ATGGTTATAA GTTTAGGCCA GTTGATGGGG TATGA
 
Protein sequence
MKHESVPIYW RNIPHYYRLV AKRCKKCGAV YFPPVIKCRC GSKELEDFEL PHEGKLVEFT 
VLYQVGTDFL KQKPLVIGLV ELSNGVKVVG QIVDVQPEKL TQGAKVEAVF RRVMVDGKYG
LVMYGYKFRP VDGV