Gene Pisl_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0725 
Symbol 
ID4616356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp658118 
End bp658471 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content42% 
IMG OID639783820 
Producttranscriptional regulator, TrmB 
Protein accessionYP_930246 
Protein GI119872239 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.872668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATAC TCGTATTACT TATACTTCAA GTTTTTACGG TTCTCTTTGC CGTATATACC 
GGTAGAGCTA AGCTTAAGAA ATTGGTTGAG AACAGACAAA ATGATATTTC GACCAACGTA
GACCCTACGA CTAGTGAGTT ATCAGATATC GATAAGGCAA TCTTAAGACT GTTAGTAGAG
CGACAAGGCG CGGTATATCA GAGCGAGATA GCGAGAGAAC TTGGGCTTCC CAAAAGCACT
GTACATAAGG CTCTACGTAG GCTCAGCGAG GCTGGATATG TAGAGATACA AAGGAGGGGC
CGTTTTAACC TCGTCGTTTT AAAAAGGGTT ACTTCAGAGG TCTCAGTAGT TTAA
 
Protein sequence
MLILVLLILQ VFTVLFAVYT GRAKLKKLVE NRQNDISTNV DPTTSELSDI DKAILRLLVE 
RQGAVYQSEI ARELGLPKST VHKALRRLSE AGYVEIQRRG RFNLVVLKRV TSEVSVV