| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0671 |
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| Symbol | sdhA |
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| ID | 4616516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 609114 |
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| End bp | 610859 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639783765 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_930192 |
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| Protein GI | 119872185 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.745903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTT TAAAATACGA CCTCGTAATA GTGGGGTCGG GAATTGCCGG CTTGCGTGCT
GCTACAGCTG CTGCTTGGAC TAGCGGCGGC AAGATCTCCA TTGCAATATT GTCAAAGGTA
CAGGCAATGC GCAGCCATAG CTTATCTGCC GAAGGCGGTA TGTCGGCAGT TCTATACCCT
GAAAAGACAG GGGACTCTCT TGAATTACAT GCCTATGACA CAGTTAAGGG TAGCGATTTT
CTCGCAGATC AAGACGCTGT ACAGATATTA GTAGAATACG CCCCCAGAGA GGTGCGCTAT
TTGGAGAGAA TCGGCGTACC TTGGAGCCGA GAGCCAGATG GGCGAATTTC ACAGAGACCT
TTTGGTGGGA TGTCAATACC GCGTACAACA TTTGCCGCCG ATAAGACAGG CTTCTTCATT
ATGTCTACAC TCTTTTCGGA AACCAGAAGG TTTGACAATA TACATGTATT TCATGAACAT
TTTGTTACGA AGTTTATAGT TGAAAATGGC GAATTCAAAG GAGTTACTGC CTACGATTTA
AAAACCGGCG AATTTAAACT CTTCTATGCC AAAGCCGGTA TCATCGCGAC AGGCGGTGCG
GGCAGGCTAT ACCGCTTCAC CACTACGGCA CATTCAACCA CTGGGGAAAC TCTAGGGTAT
GCACTAAGAG AGGGCATCGC AATTAAAGAC ATGGAATTTG TCCAATGGCA TCCCACAGCT
CTCGTCCCCA GCGGCATACT TGTTAGTGAA GCCGCCAGAG GGGAGGGAGG TTATCTCATT
AATAAAGAGG GAGAACGGTT TATGAAAAGA TACGCCCCAC AAAAGATGGA ATTGGCGCCA
AGAGATATAG TATCAAGGGC GATACTAACC GAATGTGCAG AGGGGAGGGG CTTCCAACAT
GAAACAGGTA TGTGTTACGT GGGTCTAGAT CTTAGACACT TGGGAGAGGA GAAGATAAAC
AAAAGGATAC CATTTATACG CGAACTGGCA CATAAGTATG CAGGTATCGA TGTATTCTCA
GAGCCAATCC CGGTAAGACC TGCAGTACAC TACACAATGG GAGGCATACA CACAGATACG
TGGGGCCGTG TATTGACCGC AGACGGCAAG TGGATTAAGG GCCTTTGGGC CGCTGGCGAG
GCGGCAGCCG TAAGTGTTCA CGGAGCAAAC CGTCTTGGCT CTAATTCACT AAGCGAATGT
TCAGTATGGG GGCGGTTGAC AGGCGAACAA GCTGCAAAAT ACGCAATGGA GACCCCGGCT
CTTGCATCTC CTAGCGAAAA ACTGTTAGAT ATAGCAAAGA GAGAGGAAAG TAGAATCTTT
GACGTGTTAC TTCACAAAGA GGTCAACGCG CCTAGTCCTT ATGAGGTTAA AAGACAGCTC
AATGACATAA TGGAAGAACA TTTTGGACCA TTTAGACATG CATCCTCAAT GGCCGAGGGG
CTCGCCAAAC TTAAAAAACT TAGGGAGTAT AGGTCGTTTA GAGTGGTTGA TAGCAGTAAA
GTCTACAATC AGAATCTAAA AGATGCCTTA GAGGTCGATG GAATGATAGA CCTAGCGCTC
GTCATAGGAG TGGGCGCATA TACAAGAACT GAGTCTAGAG GAGCGCATTA TAGACTTGAT
TACCCGAGGA GAGACGACGT CAATTGGCTA AAACATACAG TAGCTTATCT CTACGGGGGA
GAGATCAAGC TCACATATAC TCCGGTTACA ATAACTAAGT GGAAACCAGA GGAAAGGAAG
TATTAA
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| Protein sequence | MEILKYDLVI VGSGIAGLRA ATAAAWTSGG KISIAILSKV QAMRSHSLSA EGGMSAVLYP
EKTGDSLELH AYDTVKGSDF LADQDAVQIL VEYAPREVRY LERIGVPWSR EPDGRISQRP
FGGMSIPRTT FAADKTGFFI MSTLFSETRR FDNIHVFHEH FVTKFIVENG EFKGVTAYDL
KTGEFKLFYA KAGIIATGGA GRLYRFTTTA HSTTGETLGY ALREGIAIKD MEFVQWHPTA
LVPSGILVSE AARGEGGYLI NKEGERFMKR YAPQKMELAP RDIVSRAILT ECAEGRGFQH
ETGMCYVGLD LRHLGEEKIN KRIPFIRELA HKYAGIDVFS EPIPVRPAVH YTMGGIHTDT
WGRVLTADGK WIKGLWAAGE AAAVSVHGAN RLGSNSLSEC SVWGRLTGEQ AAKYAMETPA
LASPSEKLLD IAKREESRIF DVLLHKEVNA PSPYEVKRQL NDIMEEHFGP FRHASSMAEG
LAKLKKLREY RSFRVVDSSK VYNQNLKDAL EVDGMIDLAL VIGVGAYTRT ESRGAHYRLD
YPRRDDVNWL KHTVAYLYGG EIKLTYTPVT ITKWKPEERK Y
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