| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0612 |
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| Symbol | |
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| ID | 4617605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 561907 |
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| End bp | 562836 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639783706 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_930133 |
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| Protein GI | 119872126 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000000109591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATTACAA TAATTGGAAG CGGCAGAGTT GGCACCGCGG CGGCAGTTAT AATGGGATTG
CTTAAAATAG ACACAAAGAT TCTGCTAATA GACATCATAA AAGGGTTGCC TCAGGGAGAG
GCTTTAGATA TGAATCACAT GAGTTCAATA TTAGGTCTCG ACGTAGAGTA TTTTGGTTCT
AATGAATATA AAGACATGGA GGGTAGCGAC TTGGTAATTG TAACAGCTGG GCTTCCGAGA
AAACCAGGTA TGACAAGAGA ACAGTTGTTG GAGGCAAACG CCAAGATAGT TAGTGAAATA
GGTAAAGAGA TTAAGAGATA CGCGCCTAAC TCTGTAGTAA TATTAACAAC AAATCCGCTC
GACGCGATGA CATATGTAAT GTGGAAATCC ACAGGTTTTC CAAGAGAGAG GGTAATTGGC
TTTAGTGGCG TGTTAGACGC GGGTCGCCTT GCCTACTATG CTGCCAAAAA ACTTGGCGTA
TCGCCTGCGT CAATACTCCC CATAGTCTTG GGCCAACATG GGGAGAGTAT GTTCCCTGTG
CCAAGCAAGA GCTTTATACA TGGCGTACCG CTCAGCAGAC TATTGACAGA GGAACAATTG
AAAGAGGTTG TGGAAGAAAC GGTCAAGGCT GGTGCCAGGA TAACAGAGCT AAGGGGTTTC
TCGTCGAATT GGGGTCCGGG CGCTGGATTA GCGCTAATGG CAGAGGCTGT AAAACGTGAC
ACCAAGAGGT CTCTTATAGC CTCGGTTGTG CTTCAGGGAG AGTATGATGT GCGCGACGTC
CCAGTAGAGG TTCCAGTGAT ACTTGGGAGA AGCGGCGTTC TAAAAGTACT AGAGATTGAG
CTTTCAGCAG AGGAGAGACA GAAGTTTATG CAAAGCGTAG AGGCGATAAG GAAACTCATC
GCCTCTATAC CGTCAAATTA TCTCCAGTAA
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| Protein sequence | MITIIGSGRV GTAAAVIMGL LKIDTKILLI DIIKGLPQGE ALDMNHMSSI LGLDVEYFGS
NEYKDMEGSD LVIVTAGLPR KPGMTREQLL EANAKIVSEI GKEIKRYAPN SVVILTTNPL
DAMTYVMWKS TGFPRERVIG FSGVLDAGRL AYYAAKKLGV SPASILPIVL GQHGESMFPV
PSKSFIHGVP LSRLLTEEQL KEVVEETVKA GARITELRGF SSNWGPGAGL ALMAEAVKRD
TKRSLIASVV LQGEYDVRDV PVEVPVILGR SGVLKVLEIE LSAEERQKFM QSVEAIRKLI
ASIPSNYLQ
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