Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0598 |
Symbol | |
ID | 4617948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 547500 |
End bp | 547952 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783690 |
Product | hypothetical protein |
Protein accession | YP_930119 |
Protein GI | 119872112 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00015884 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000111516 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTTCAT TACGAAGATT TACGGCGGAG CCGCATATAC ATGCAAAACT GCTTGTCGCC GCCCTCTTGA TTTCCAATGG CATACGTAAA GACGCCGAAG CTGTGTTTTA CCTAGTAGAT TTACAAAAGA CAGTAAAAAT TCTTGGCAGC CGGGTAAAGA GACTTTTTCC AGATGAAGAC TCCTCAGTGG GATTTCTAAA AAAGGCATTT GCAGGCGAAA AATTAACAGG TGTGATAGTA AAGAGGGGGG CTTCTGACTT AACTATAGGA ACGACAGTGG GGCCGGGAGG TCGACGTAGG TGTATGCCTA ACCCACCCTT TACCTACGTG GTAGTGTTTG AGCCATTTGA CATAGACTTG GAATGTGATG CTGGGTTAGG AAAACTACCA CCACATCACC AAGTCGTAAT TATTAATATT GAAACTGATA GACTTCTCTA CCACAGGCGA TAA
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Protein sequence | MTSLRRFTAE PHIHAKLLVA ALLISNGIRK DAEAVFYLVD LQKTVKILGS RVKRLFPDED SSVGFLKKAF AGEKLTGVIV KRGASDLTIG TTVGPGGRRR CMPNPPFTYV VVFEPFDIDL ECDAGLGKLP PHHQVVIINI ETDRLLYHRR
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