Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0597 |
Symbol | |
ID | 4617621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 546184 |
End bp | 547485 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639783689 |
Product | GTP-binding signal recognition particle |
Protein accession | YP_930118 |
Protein GI | 119872111 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000223356 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00000371893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGGCGC TTGGCGAAGT ATTTAGTAAG CTTGTCGAAA AAATTAGAGG TGTTAGTTAT ATAGACGAAG CAACGTTACA AGAGCTTTCA AGAGAGATTC AAAGAGCGCT TCTTAAAGCC GACGTTCCTC TAGATATGGT AAAGACGTTT ACTGAAAATG CAGTAAAGAG AATGCGTGAG GAGAAGCCGC CTGCCGGTAT ACCGCCGAGG GAATACGTCT TATATATCCT ATACGATGAA TTAGTAAAGC TGTTGGGCGG GGAGCAACCC GCCGAGTTTA AACCAGTTAA AAAACCCTAT TTGGTGCTCC TCCTAGGTGT CGAAGGAAGC GGGAAAACAA CGACAGCCGC AAAATTAGCT AGATATTTGG TAAAGAGAGG ATATAGAGTG GGGCTTGTGG AGACAGATAC TATAAGACCC GCCGCGTTTG ACCAGTTGAA ACAACTTGCG GAAAAGATAG GTGTCCCTTT CTATGGCGAA AGAGATAGTA AAGATGCTGT AGAAATCGCA CGTCGCGGTG TCCAAAATTT CAAAAATATG GACGTGGTAA TTATAGACAC TGCAGGGCGT CATAAAAACG AAGAGGCTCT ACTACAAGAG GTAAAGATGA TATATGAAGC TGTAAACCCC GACGAGGTTA TACTTGTAAT AGATGCGACA GTTGGTAAAC TAGCGGCTGC ACAAGCGGAG GCCTTTATGA AATATCTACC GATACATTCG GTAATAATTA CAAAGATGGA TAGCACTGCG AGAGGCGGCG GCGCATTAGC CGCTGTTATT AAAACGGGGG CTAGGGTGAA GTTTATAGGC GTTGGCGAAG ACGTAGACGA ATTCGATTTG TTTAACCCAC GTAAGTTTGT GGCAAGAGTC CTCGGGATGG GCGACCTAGA CGCGTTAGTA GAAAAGATAA AAGCCGTATT TGAAGAAGAG AAGGTTCTAC AGGAGATAGA GTCTGGGAGA TTAGATCTTT TAACTTTTAA AAAACAGATA GAGGGTTTGT TAAAACTTGG GCCGCTGAGT AAGGTACTTC AACTGTTGCC AGGGGGTTTT GCCGCAAAAA TCTCGGAGGA GCAAGTTGAA CTTTCGCAAA AGAATCTAAA GAAGTGGTAT GCCATATTAA GTTCTATGAC AATAGAAGAG TTAAAGAACC CAGATATTCT AAATGCTTCA AGAATCCGCA GAATAGCGCT TGGCGCTGGC GTTACACCTA AAGACGTAAA AGAGATGCTA ACTGTATATG AAAACCTGAA GAAGATGTCT AAGACTTTAA AGAGACAGCT GAGAATGAGG ATACCAAAGT GA
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Protein sequence | MKALGEVFSK LVEKIRGVSY IDEATLQELS REIQRALLKA DVPLDMVKTF TENAVKRMRE EKPPAGIPPR EYVLYILYDE LVKLLGGEQP AEFKPVKKPY LVLLLGVEGS GKTTTAAKLA RYLVKRGYRV GLVETDTIRP AAFDQLKQLA EKIGVPFYGE RDSKDAVEIA RRGVQNFKNM DVVIIDTAGR HKNEEALLQE VKMIYEAVNP DEVILVIDAT VGKLAAAQAE AFMKYLPIHS VIITKMDSTA RGGGALAAVI KTGARVKFIG VGEDVDEFDL FNPRKFVARV LGMGDLDALV EKIKAVFEEE KVLQEIESGR LDLLTFKKQI EGLLKLGPLS KVLQLLPGGF AAKISEEQVE LSQKNLKKWY AILSSMTIEE LKNPDILNAS RIRRIALGAG VTPKDVKEML TVYENLKKMS KTLKRQLRMR IPK
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