| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0571 |
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| Symbol | |
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| ID | 4616287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 526636 |
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| End bp | 527199 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639783661 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_930092 |
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| Protein GI | 119872085 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00111432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCTTGG TTAGAGCTTT TGTAGCTATC GACGTCGAAA ATCCGGAGAT TGTTAAAAAA
GTAGAGGAAA TACAAAGAGA GGTTCTAAGA CTTGGTCTCG ACATAAAGCT TGTAGAAAAA
GAAAATTTAC ATCTAACTCT GCGTTTTTTG GGAGAAATTC CTCAAAGCCG AGTTAATGAT
ATTGTTAAAT CCTTAACAAC CATCAGATTC AGTAAGTTTA AAATCGCGCT TTCTGGACTT
GGCGTATTTC CGGACTTGGC TAAACCTCGT GTATTATGGA TTGGCGTTTC TAAGGGTTTA
GAAAATCTTG TCAATCTCGC AAATATAGTA AGAAATTTAG TAGATAAATA TGCAGAACAT
AGAGAGGATC GCGAATTTTC TCCTCATCTT ACTATAGGGA GAATTAAATC TGGAAGAAAC
ATAGATAAAC TCAGAGAGGT TATTGAGCGC TATAGAGAAG CCGAATTCGG CGTTATCGAA
GTAGATAAGG TGAAACTAAA AAAGTCAGTG CTAACGCCGA GAGGGCCTAT TTATAGTGAC
CTCTTTGTAC AATATCTCAC GTGA
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| Protein sequence | MTLVRAFVAI DVENPEIVKK VEEIQREVLR LGLDIKLVEK ENLHLTLRFL GEIPQSRVND
IVKSLTTIRF SKFKIALSGL GVFPDLAKPR VLWIGVSKGL ENLVNLANIV RNLVDKYAEH
REDREFSPHL TIGRIKSGRN IDKLREVIER YREAEFGVIE VDKVKLKKSV LTPRGPIYSD
LFVQYLT
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