Gene Pisl_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0542 
Symbol 
ID4616523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp504558 
End bp505712 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content45% 
IMG OID639783632 
Productradical SAM domain-containing protein 
Protein accessionYP_930063 
Protein GI119872056 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0194035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC TGAGCTACGC TGACCAAACA TTTTTTATTA TAAAAAGCGG TTTTGCTGTG 
GAAGCTGTAC TTAGTAAGAA ATTGTCAGAT GGCAGAATAG AGTGTTTGGC TTGTGCCAGG
AGATGTAAGT TAAGAGAGGG CCAGACGGGG TTCTGTGGTG TTAGAACTGT AAGAGACGGA
GTCTTAAGGC TCGATGTATA CGGCTTAATT TCTGCCATAG CTGTAGATCC AATAGAAAAA
AAGCCGTTGA CACATTTCTA CCCAGGGGCT TTAGTTCTCT CGTTTTCAAC TTTTGGATGT
AACTGGGCTT GTCAATATTG TCAAAACTAC GAGCTAAGCC AGAGGAGGAG AGCTGAAGGT
TTTGAAGTTA CGCCGGAGTT ATTGGTAAAG ATTGCAGAAA GCTACGGAGC CCACGGAATT
ACATACACAT ATAACGAGCC GTCAATTTTC ATAGAGTTTG CCCACGACGT CGGCATATTA
GCCCGTTCAA AAGGGCTCTT TAATACCTTT GTCACCAATG GCTATATGAC CCCGGAGGCT
GTGAAATACG CAAGCGAGTT TTTAGATGCG GCAACTGTAG ACTTCAAAGG AAATGCAGAC
GAGAAATTCC TAAGGAGATA TGTGTATATT ACTGACGCAG AGCCCATCTT TGAGACTCTC
GCAGAGATGA AAAAATATGG CATATGGGTA GAGATAACAG ATCTTGTCGT GCCTGAAGTT
GGCGACGACT TAGAAAAGGC TAGAAAACTC GTGAGACGGA TAATAGATAT ATTAGGGCCA
GAAGTCCCAA TACACTTCCT ACGCTTCCAC CCAGATTACA ACATGCGCCA CCTCTTTCCA
ACACCTATAG AGACCTTGGA AAAACATGTA GAGGTCGCCA AGGAGGAGGG GGCAAAATAT
GCCTACGTGG GCAACGTGCC TGGCCACCGT TATGAACACA CCTACTGTCC AGAGTGTGGG
CGTGTGGTAA TCAAGAGAAG GGGCTTTGAC ATCTTAGAAA TAAACCTTAT AGAGAAGGGG
GGAGAATACA GATGTAAGTT CTGTGGCGCC AAGATTAACA TAAAGGGGCG TATTATGCCA
ACGTGGAGAG AGGAGTTTCG CTTTGTCTAT GTGCCGATAC ATGCATTTGC CAAGTGGGTC
AAGCGCGAAT CTTAA
 
Protein sequence
MNALSYADQT FFIIKSGFAV EAVLSKKLSD GRIECLACAR RCKLREGQTG FCGVRTVRDG 
VLRLDVYGLI SAIAVDPIEK KPLTHFYPGA LVLSFSTFGC NWACQYCQNY ELSQRRRAEG
FEVTPELLVK IAESYGAHGI TYTYNEPSIF IEFAHDVGIL ARSKGLFNTF VTNGYMTPEA
VKYASEFLDA ATVDFKGNAD EKFLRRYVYI TDAEPIFETL AEMKKYGIWV EITDLVVPEV
GDDLEKARKL VRRIIDILGP EVPIHFLRFH PDYNMRHLFP TPIETLEKHV EVAKEEGAKY
AYVGNVPGHR YEHTYCPECG RVVIKRRGFD ILEINLIEKG GEYRCKFCGA KINIKGRIMP
TWREEFRFVY VPIHAFAKWV KRES