Gene Pisl_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0486 
Symbol 
ID4616635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp456140 
End bp457075 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content47% 
IMG OID639783572 
ProductRad51-like protein 
Protein accessionYP_930007 
Protein GI119872000 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.100378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA AGAAAGCCGA TTTATCTTCG CTTGAGGGCG TGGGTCCTAA GACGTTTGAA 
AAGCTAATGG AGTTGGGTAT TACATCTCTA GAACATCTAT CTGAATTTAC GGCGGAGGAG
TTAGCTGAGG CAGGTATCGA ATATGAAAGA GCTGTAAAGC TTCTACAGCA AGTTTTGCAA
AAAGTCGGCG GGGTGAAGGC GGTGACATTT GGCGAGTTTA GACAGAGACA AGTCAAGACT
TTTAAGACTG GGCTTGTAGA ATTTGACGAA AAAACTCCTT GGAGAGGGAT AAGGGAGGGC
TTTATATATG AATTTGCTGG CGAATATGGC ACTGGTAAGT CAATGTTTGC ACATCAACTT
GCCGTGGTAG GACTTAAGGA GGGTTTTACT GCGAGAGTTG TATATATAGA TACAGAGGGC
ACGTTTAACC CAACGCTCGT CGAGACAATT GCGAGGCGGT TTGGTGTAGA AATTGAGAGA
TTAGACACGT CGCTTGTTTT ATATCAACCG GCTAATGTAA TGCAGTTAGA ACAGATAGTG
AAATACGACA TCCCACGCCA TATACAAGAG GGTTGCCGTC TTGTGATAAT AGATACAATC
ACGGCGTTGT ATCGTGCTGA GTTTCCCGGT AGGGAGATGT TGGCGGCTAG ACAACAGCGA
ATTCACTATC TCGTCGATTG GCTGAGACGC CATGCGAGGA CGTTCGGCGT AACTTCTATT
TTGGCAAATC AAGTGATGGA CGTGCCCGAG ATTTTTGCCG GCGGCGTGAA AAGGCCGGCG
GGCGGCAACG TCTTGGCACA TACCGTAAAC GCGAGATTTA TGATGGTGCG GCCTAACAAG
GCGAAGCTAG AGGGTTACAT GTGGCCATTA GACGTGCCTG GTATGGCTCC TGACGTAAGG
ATAGAGTACA GAATTACGGA AGCCGGGCTT GAATAG
 
Protein sequence
MSRKKADLSS LEGVGPKTFE KLMELGITSL EHLSEFTAEE LAEAGIEYER AVKLLQQVLQ 
KVGGVKAVTF GEFRQRQVKT FKTGLVEFDE KTPWRGIREG FIYEFAGEYG TGKSMFAHQL
AVVGLKEGFT ARVVYIDTEG TFNPTLVETI ARRFGVEIER LDTSLVLYQP ANVMQLEQIV
KYDIPRHIQE GCRLVIIDTI TALYRAEFPG REMLAARQQR IHYLVDWLRR HARTFGVTSI
LANQVMDVPE IFAGGVKRPA GGNVLAHTVN ARFMMVRPNK AKLEGYMWPL DVPGMAPDVR
IEYRITEAGL E