Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0279 |
Symbol | |
ID | 4617182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 279621 |
End bp | 280589 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639783358 |
Product | argininosuccinate synthase |
Protein accession | YP_929801 |
Protein GI | 119871794 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0137] Argininosuccinate synthase |
TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00305758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGGCA TGTACGAAGG GCTGTACCCC TTGGGCACTG CTCTTGCCAG ACCTCTAATT GCAGCTAAGG CGGTAGATGT GGCGCGGAGA GTTGGTGCAG ATGCCATAGC CCACGGCTCT ACTAGCAAGG GCAACGACCA AGTGAGGTTT GACGTAACTG TCAAAGCCCT TGCGCCAGAC CTAAAGATCA TCGCCCCTGC GAGAATATGG GGTATGACGC GGGCTGAGGA AATTGAATAC GCCAGGAGAC ACGGCTTACC CATCAGCGAG GAGCACAAGA AGTATAGTAT TGACGACAAC TTATGGAGCC GGTCTATCGA AGGAGGGCCT CTAGACGACC CCATGGCCGA GCCAGGAGAA GACGCCTTCA AATGGACTGT CTCCCCTGAA AAGGCGCCAC AAGAGCCTGT CTATATTACC ATAGGTTTTA AAAACGGCAT ACCAACCTCA ATAAACGGGG AGAAGATGGA CATGGTATCT CTCGTTACAA CTCTGAACCA CATAGGCGGA GCCCACGGAG TGGGGCGTAT AGACCATATC GAAAATAGGC TCGTCGGCTT CAAAAGCAGA GAAGTCTACG AGGCACCCGC CGCCGTGATA TTATTCCACG CCCATAGAGA CTTAGAAAAG CTCGTACTGA CGCCGCGGGA ACTTAGGTTT AAACACCACG TCCTAGACCC CCAGTGGGCC GACTTAGTGT ACCAAGGCTT ATGGGTAGAG CCACTCCGTA ACGCACTTGA AAAAGCCGCA AAAGAGATGG AAAGATGGGC CACAGGGGAG GTGAGAGTTA AGCTCTATAA GGGCTCTGTA CAAATCGTGG GCCGCGACTC GCCATACGGC GGCTACAGCA AGGAGCTTGC TGACTACAGC GCCGGGTGGT ACCCCAGCGA CGAAGAAGCT AGAGGATTCA TCGAGATATG GAGTCTCCAC TCGCTGACTG CCCTTAGGAA GAGACAGAAC AAGCTCTAA
|
Protein sequence | MNGMYEGLYP LGTALARPLI AAKAVDVARR VGADAIAHGS TSKGNDQVRF DVTVKALAPD LKIIAPARIW GMTRAEEIEY ARRHGLPISE EHKKYSIDDN LWSRSIEGGP LDDPMAEPGE DAFKWTVSPE KAPQEPVYIT IGFKNGIPTS INGEKMDMVS LVTTLNHIGG AHGVGRIDHI ENRLVGFKSR EVYEAPAAVI LFHAHRDLEK LVLTPRELRF KHHVLDPQWA DLVYQGLWVE PLRNALEKAA KEMERWATGE VRVKLYKGSV QIVGRDSPYG GYSKELADYS AGWYPSDEEA RGFIEIWSLH SLTALRKRQN KL
|
| |