Gene Pisl_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0279 
Symbol 
ID4617182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp279621 
End bp280589 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID639783358 
Productargininosuccinate synthase 
Protein accessionYP_929801 
Protein GI119871794 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00305758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA TGTACGAAGG GCTGTACCCC TTGGGCACTG CTCTTGCCAG ACCTCTAATT 
GCAGCTAAGG CGGTAGATGT GGCGCGGAGA GTTGGTGCAG ATGCCATAGC CCACGGCTCT
ACTAGCAAGG GCAACGACCA AGTGAGGTTT GACGTAACTG TCAAAGCCCT TGCGCCAGAC
CTAAAGATCA TCGCCCCTGC GAGAATATGG GGTATGACGC GGGCTGAGGA AATTGAATAC
GCCAGGAGAC ACGGCTTACC CATCAGCGAG GAGCACAAGA AGTATAGTAT TGACGACAAC
TTATGGAGCC GGTCTATCGA AGGAGGGCCT CTAGACGACC CCATGGCCGA GCCAGGAGAA
GACGCCTTCA AATGGACTGT CTCCCCTGAA AAGGCGCCAC AAGAGCCTGT CTATATTACC
ATAGGTTTTA AAAACGGCAT ACCAACCTCA ATAAACGGGG AGAAGATGGA CATGGTATCT
CTCGTTACAA CTCTGAACCA CATAGGCGGA GCCCACGGAG TGGGGCGTAT AGACCATATC
GAAAATAGGC TCGTCGGCTT CAAAAGCAGA GAAGTCTACG AGGCACCCGC CGCCGTGATA
TTATTCCACG CCCATAGAGA CTTAGAAAAG CTCGTACTGA CGCCGCGGGA ACTTAGGTTT
AAACACCACG TCCTAGACCC CCAGTGGGCC GACTTAGTGT ACCAAGGCTT ATGGGTAGAG
CCACTCCGTA ACGCACTTGA AAAAGCCGCA AAAGAGATGG AAAGATGGGC CACAGGGGAG
GTGAGAGTTA AGCTCTATAA GGGCTCTGTA CAAATCGTGG GCCGCGACTC GCCATACGGC
GGCTACAGCA AGGAGCTTGC TGACTACAGC GCCGGGTGGT ACCCCAGCGA CGAAGAAGCT
AGAGGATTCA TCGAGATATG GAGTCTCCAC TCGCTGACTG CCCTTAGGAA GAGACAGAAC
AAGCTCTAA
 
Protein sequence
MNGMYEGLYP LGTALARPLI AAKAVDVARR VGADAIAHGS TSKGNDQVRF DVTVKALAPD 
LKIIAPARIW GMTRAEEIEY ARRHGLPISE EHKKYSIDDN LWSRSIEGGP LDDPMAEPGE
DAFKWTVSPE KAPQEPVYIT IGFKNGIPTS INGEKMDMVS LVTTLNHIGG AHGVGRIDHI
ENRLVGFKSR EVYEAPAAVI LFHAHRDLEK LVLTPRELRF KHHVLDPQWA DLVYQGLWVE
PLRNALEKAA KEMERWATGE VRVKLYKGSV QIVGRDSPYG GYSKELADYS AGWYPSDEEA
RGFIEIWSLH SLTALRKRQN KL