Gene Pisl_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0253 
Symbol 
ID4617397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp249720 
End bp250142 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content46% 
IMG OID639783333 
Productsignal-transduction protein 
Protein accessionYP_929776 
Protein GI119871769 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00276555 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATA GAGTAAAATA TTACATCAAG CGAGAGCCTA TAACGGTCCC CCCTGGGACT 
ACTCTGAAAG AGGCCGTAGA GATTATGGCC CGGAACAATA TAGGTCTCGT AGTTATTGTC
GACCAATCTA GGAGGCCTAT AGGCGTTTTG TCTGAACGTG ATGTAATAAG AGCTCTGGCA
GCTGGGAAGT CCTTAAATAC CCCAGTAGAA GAGGTTGGGA CCATTGGAAA TTTACTTACT
GTGAGAAAAG ACGACGATAT ATACACGGCG GTTAAAGCTA TGCGAAGCCG TGGAATACGC
CACATAATTG TTGTTAACGA AGATGGCACT ATAGCCGGCG TGTTGTCAAT AAGAGACATC
GTAGAAGACC GCGCGTTAAA AGCTATTGGC GATAAGATAT GGTGGCCTCC GCCAGAAGAG
TAA
 
Protein sequence
MGDRVKYYIK REPITVPPGT TLKEAVEIMA RNNIGLVVIV DQSRRPIGVL SERDVIRALA 
AGKSLNTPVE EVGTIGNLLT VRKDDDIYTA VKAMRSRGIR HIIVVNEDGT IAGVLSIRDI
VEDRALKAIG DKIWWPPPEE