Gene Pisl_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0198 
Symbol 
ID4616529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp188031 
End bp189326 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content53% 
IMG OID639783280 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_929723 
Protein GI119871716 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0678003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGG TGCCTAAGCT GAACTCGGTC ACACTCCACT ATTTTGAAAA CTGTGTAGGG 
TGCGCCGCAT GTGCCCCCTC TTGCCCCTAC TTCTACGTAG ACGAGAGGTA CAGCCCCGTG
GAGAAGGCTG AGTTCCTAAG AGAGATGCTT AGGGCGAAGT ATACGTTAGC TGGGAGGCTT
TTCGGCCGTT TCGTCGGCGC GAGGATGCCC AAGAGCGAGG ACGAGATGTG GAAGATCTTG
GAGTTTGCCT ATAGATGCAC CAACTGCGGC CACTGCTATG TGACATGTCC TTTTGGCATA
GATAGCGGCG CGATGGTGCG CTTGCTAAGG CAGGCGCTTT ACTCGACCGG AATAGCGCCA
ACTTTAATGA AGCAATTTGC GGGCTTCGAG GGAAGCGGCC AGTATCTACA GCACCCGTCT
GTAAAAGCTA TGTGGGAAGC CTTCATGACC GAGGTCGCCA AGCTTGGGGC TCCCGTTGAC
AAGAAGGGCG CCCGGGTACT CCTCATGATT TCAGTTATGG ACGTGGTGTT GCTGAAGGAC
ACTGTTTTGA ACACTATAAA GATTTTAAAG AAGGTTGGCG AAGATTTTAC GATTCCGTCA
CGGCCACTAG GCGTTAGGCC GCCCATTGGG GCAGTGGTGG GAGACCCGGC GGCACAGAAG
ACAGCTATAG AAGACGTAGT TAAATACGCC GAGTCTATTT CGCCGCAGAT CCTCGTCACA
ATAGATGGGG GCTTCGTCTA CCCCAACCTC AGGTTCGAGG CTACAAACCT ACTGAGGAGG
AAGTTCAGCT TCAAGGTTTA TCACATCACA GAGCTCCTCG CCGAGTATCT CAGGGAGGGC
AAGTTGAAGC TTAAGAAGAC AGGTGCCAAA GTCACTTGGC ATGACCCGTG TCAGTTGGGT
AGGAGAGCCG GCGTGTTTGA AGAGCCGAGG GAGGTGCTGA AGGCGTTTAC CGACTACCGC
GATCTTCCTC ACAACAGAGC TAACAGCCTT TGTTGTGGCG GCGGAGATGG CATAAACTGT
CTCACGAAGG AGATGCACAT GGCCATGGGC AAGCTCCTGG GGATGGACAT ATGGGGGATG
TTGAGCGCCC GGGAGAAGGA ATTTGTAGAG AAGAGTGAAG ATGCCTATAA GAAGGCCATA
AGGAGGAAGA TGGACGACGT GAAGAAGAGC GGTGCGGAGG TTGTCGTCAC TGCTTGCCCA
GTCGGTATAG AAACTATTAG GTTGGGCACA CAGCTCTACG GCGTAAATGC CAAGGTAGTA
CACATCGTAG ACCTAGTCGC TGAGGCCCTG GAGTAA
 
Protein sequence
MLTVPKLNSV TLHYFENCVG CAACAPSCPY FYVDERYSPV EKAEFLREML RAKYTLAGRL 
FGRFVGARMP KSEDEMWKIL EFAYRCTNCG HCYVTCPFGI DSGAMVRLLR QALYSTGIAP
TLMKQFAGFE GSGQYLQHPS VKAMWEAFMT EVAKLGAPVD KKGARVLLMI SVMDVVLLKD
TVLNTIKILK KVGEDFTIPS RPLGVRPPIG AVVGDPAAQK TAIEDVVKYA ESISPQILVT
IDGGFVYPNL RFEATNLLRR KFSFKVYHIT ELLAEYLREG KLKLKKTGAK VTWHDPCQLG
RRAGVFEEPR EVLKAFTDYR DLPHNRANSL CCGGGDGINC LTKEMHMAMG KLLGMDIWGM
LSAREKEFVE KSEDAYKKAI RRKMDDVKKS GAEVVVTACP VGIETIRLGT QLYGVNAKVV
HIVDLVAEAL E