Gene Pisl_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0178 
Symbol 
ID4616855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp171280 
End bp172623 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content51% 
IMG OID639783260 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_929703 
Protein GI119871696 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.795919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.697934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGC GTGTAGTTAT CTCATCTTTC AGAGGTATGT CTGGGAAGAC TATTATCTCT 
CTTGCATTGA TATATGGTCT CTTTAGGCAG GGGCTTAGAG TTGCCCCCTT TAAGGTTGGG
CCTGACTATA TCGACCCGAG CTACCACACA GCGGCGGCGG GGAGGCCCAG CAGAAACCTC
GACGTGGTGT TGATGGGAGA GAGGGGGGTG GTGGAGCGTT TTGTAAAATT TTCAAGAGGC
GCAGACATTG CCGTTGTGGA GGGCGTGTTA GGCCTCTACG ACTCCTTCGA CGGCGTTTCT
GAGCTCGGCT CCACGGCGCA GGTGGCTAAG CTGTTGAAAG CTCCTGTTTT GTTAGTGTTA
AACGGGGAGA GAGTAAATAG AACTCTTAGG GCTATCGTTA GGGGGTTAAG GCAGTTTGAC
CCCGAGATTA AAATCCCGGG AGTAGTTTTA ACAAACGTCA CTAGGAGTCA GGCGGAGAAG
CTGAAGAAGT CCCTCCCCGA GGAGGGGGTG GAGGTGTTGG GCGCAGTGCC TAAGAGTGAG
AAGTTGGCAG AGGTATTTTC CTATAGACAT CTCGGCCTTA CGCCAGTGGG CGAAAGAGGG
GATGTCCCCC GTATTTTTGA AGTTGTTGAA AAATATGTGT TGCCGTATAT AGATTTAGAT
GGCGTTATTG CTATTGCCAA ATCTGCCGGC GATTTTGCAG TAGATATTAA AGAAGAAGAT
CCTGGGGGCT TGGGCGGGTG TAGAATTGGG ATTGTGTTTG ATAGAGCTTT TACCTTCTAC
TACCCCGAGG TCTTCGAGGA GGCTAAGTCG CTGGGAGAGG TGGTGTTTTT AGACTCGCTG
AAGATGCAAG AGTTGCCTCA AGTAGACGTG GTTTTTATAG GCGGGGGCTT TCCTGAATCT
CTAGCAGAAG AGTTAGAACG TAACAAACCG TTTAAATCCT CGTTGTTGAA ATTTATAGAG
CGGGGGGGCA AGGTATATGC CGAATGCGGT GGCCTTATGT ATCTTACCTC TTCTATAGTG
GTAGAGGGCT CGGAGTACGA GATGGTTGGC GCGATAGACG GCATAACAGT TATGATGAAG
AGACCGGTAG GGAAGGGATA CGCTTGGGGC GTGGTGGAGA GGAGGACGCC TATAGCCCCT
CCGGGGACTA GGCTTGTGGG ACACGAGTTT CATTACTCCA AGATTATCCT CAGGGAGGAG
GTAGAGACCG CTATAAGGCT GGAGAGGGGG GTTGGAATCG GCGGCGGTAG AGACGGCATT
GTAAAGGGCA ATATGCACGC ACAATATCTC CATATACATC CCTACACCTA CAGCGTGTTG
AGGACGCTAT GCCGCTCTAC GTAG
 
Protein sequence
MIPRVVISSF RGMSGKTIIS LALIYGLFRQ GLRVAPFKVG PDYIDPSYHT AAAGRPSRNL 
DVVLMGERGV VERFVKFSRG ADIAVVEGVL GLYDSFDGVS ELGSTAQVAK LLKAPVLLVL
NGERVNRTLR AIVRGLRQFD PEIKIPGVVL TNVTRSQAEK LKKSLPEEGV EVLGAVPKSE
KLAEVFSYRH LGLTPVGERG DVPRIFEVVE KYVLPYIDLD GVIAIAKSAG DFAVDIKEED
PGGLGGCRIG IVFDRAFTFY YPEVFEEAKS LGEVVFLDSL KMQELPQVDV VFIGGGFPES
LAEELERNKP FKSSLLKFIE RGGKVYAECG GLMYLTSSIV VEGSEYEMVG AIDGITVMMK
RPVGKGYAWG VVERRTPIAP PGTRLVGHEF HYSKIILREE VETAIRLERG VGIGGGRDGI
VKGNMHAQYL HIHPYTYSVL RTLCRST