Gene Pisl_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0176 
Symbol 
ID4618110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp168662 
End bp170266 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content44% 
IMG OID639783258 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_929701 
Protein GI119871694 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTA AGGAAGTAGT TAAGATCAAC GATATAAGCA AACCGGTCAA AAGGCTAGTT 
CAACTAAAGC TAGAAGATTT AATGCCCCTC CCGCCGCCCT ACGACAAGTC AGGCTCAGAG
CCCCCCTTAA CAACGCCAAA GCCAGAGTGG GAAGAAACCT ATGTAACAGA GCTTGACGGC
TATATTGCTA TAGATCTGCC GTGGAAGCCG AAGACTAAAG AAGAAGAGGA GAGACTTATA
CAGAAGTTTC TCGAAGGGCT GAAAAAGCTG ACTTCTAGAG AGAGCAACTG GACGTTTCTC
CAACCGCTAC TCCTATCACT AGAATACTGT GCAAAATGTC AAAACTGTGC AGAGGCATGC
CCCATATATA TAGCCAGCGG CAGGAAAGAT ATCTATAGGC CGACATATAG AGCAGAGGTT
CTGCGGAGGA TATACAATAA GTACATAGCT AAAAAACCCG GAGGAGATAT AGAACTAAAT
ATATTCACCT TGATGAGACT TGCTGAACTG GCATATAGAT GTACCTTATG TAGACGTTGT
GTCCAAGTGT GTCCGCTTGG CATAGACAAC GGCTTGATCG CAAGAGAGAT AAGAAAATTA
TTCTCCCAAG AACTTGGCAT AGCTCCGAAA AATCTCCACG AAAAAGGCAC AGTACAACAC
CTAAAAGTAG GCTCATCAAC AGGAATGACA CCCAAGGCGT TGTTAAAAAT GGTGAAATAC
ATAGAAGACT TCATATACGA AAAAACCGGC AAGAGGATAA AAATACCCGT CGACCAGAAA
GGTGCAGACA TATTATTAAT CCACAACGCC GGCGAATTTC TATCCTGGCC TGAGAACGTC
GCTGCCTTCG CCATAATATT CGAAGAGGCG GGCTTAAGCT GGACGTTAAG TAGCGAGCCT
CTGGGATACG ACGTAGTTAA CTACGGCGCA TGGTACGACG ACGTACAGTT AGCTAGAATA
GCTCTAAAAC ATATAGAAAT CGCCCGCAAG CTTGAAGTTA AGAAGATAGT AGTAGGAGAG
TGTGGACACG CCACTAAAGC TCTCGTTGTG GTTGCAGACA GAATACTCAC AGACGAGAAC
AGAATACCGC GGGAAAGCGC TCTGCCACTG TTGAGAGATA TCGTCATGAG CAACAAGCTG
AACTTAGACC CCTCGAAAAA CAACTTTCCT GTGACTCTAC ACGACCCATG TAACATAGTG
AGGCTTTCAG GTATTGTAGA GCCGCAGAGA GAGATCTTAA GGAAAATAGC ACCTATGTTT
AGAGAGATGG TGCCACATGG CGTGTATAAC TATTGTTGTG GCGGTGGAAG TGGGTTTGCG
ATAATGCAGT CGTTAAACTT CCCCGAATGG AGAAATAAAG TTGCCAGCAG GATGAAGTTT
AAACAGATAC TAGAAGCATT CAAAGATGTA TTAGATCCAA AAATACCGAA GTATGTATGT
GCGCCTTGTT CCAATTGTAA AGGCGCTATC AGAGACGTAT TAGCTCACTA CAGAGCCACC
GAGCTCTATA ATATCCATTA CGGAGGCTTA GTAGAACTAA TAGTAAACGC CATGGTTGAC
TTAAAAGAGC CCTATCTAGA CTTTCTTAAA GAAAAGAAAT CTTAG
 
Protein sequence
MSRKEVVKIN DISKPVKRLV QLKLEDLMPL PPPYDKSGSE PPLTTPKPEW EETYVTELDG 
YIAIDLPWKP KTKEEEERLI QKFLEGLKKL TSRESNWTFL QPLLLSLEYC AKCQNCAEAC
PIYIASGRKD IYRPTYRAEV LRRIYNKYIA KKPGGDIELN IFTLMRLAEL AYRCTLCRRC
VQVCPLGIDN GLIAREIRKL FSQELGIAPK NLHEKGTVQH LKVGSSTGMT PKALLKMVKY
IEDFIYEKTG KRIKIPVDQK GADILLIHNA GEFLSWPENV AAFAIIFEEA GLSWTLSSEP
LGYDVVNYGA WYDDVQLARI ALKHIEIARK LEVKKIVVGE CGHATKALVV VADRILTDEN
RIPRESALPL LRDIVMSNKL NLDPSKNNFP VTLHDPCNIV RLSGIVEPQR EILRKIAPMF
REMVPHGVYN YCCGGGSGFA IMQSLNFPEW RNKVASRMKF KQILEAFKDV LDPKIPKYVC
APCSNCKGAI RDVLAHYRAT ELYNIHYGGL VELIVNAMVD LKEPYLDFLK EKKS