Gene Pisl_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0172 
Symbol 
ID4618318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp163648 
End bp164415 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID639783254 
Productnitrate reductase, gamma subunit 
Protein accessionYP_929697 
Protein GI119871690 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGACG CCGTGTTGTT CATAGGCGTC CCATATCTCG CCCTAGTAAT ACTTATTGTA 
GGAGTTCTAG CCAAGATAGG CGCCTGGATT TCGCCACGTG GACTAACCTC TCTAGCCTCC
GTAGCTGTAG TTTCCTACAA CTGGAGCGCA GGAGCTAGAG CTGGAGAGGT GTTAAAACGG
ATATTGACAT TCTACACGCT GAAATACACC AACGACAAGT TGCTCTACTG GGGTGCGCTC
CTCTTCCACT GGGGTATATT TCTAACTCTC TTCCTAGGCC ACACAGCTCT CTTCTTCTCC
CCTGAGCAAC TTGCGGCAAT GGGCATAGAC CCAGCCACTA GAAAAATAAT AGCTATAGGC
CTAGGGACGC TATTCGGCAT TGTGGTAATT ATAGGATTAA TCTTGCTCTG GGCTAGGCGG
CTGACAAAGC CTGAGGTAAA AAGCTTTACC TTCGCCGACG ATTGGTTTGC ACTAGTCTTA
ATAACGGCGA TAGTACTCGT AGGCCTAGTC AACACCGCCG TCATACATCC ACATTATGAC
AAAACAGTTA CGCCGTGGCT ACAAAATCTA CTGACAGGCA ATGTAGCCGC GGCGTTAGAG
GCCATAACTA AGGCGGAGCC GCTGGTTAAA TTACACATAT TCCTCGCAGA AGTGTTAATG
ATATACGTCC CATTTGGAAA AATGATACAC CCATTTACAA TATTCTTTGA ACCTACAATT
ACATCCCCAC CATATAAAGT ATCTGGAAGC GAAGTTATTT TAAAGTAA
 
Protein sequence
MLDAVLFIGV PYLALVILIV GVLAKIGAWI SPRGLTSLAS VAVVSYNWSA GARAGEVLKR 
ILTFYTLKYT NDKLLYWGAL LFHWGIFLTL FLGHTALFFS PEQLAAMGID PATRKIIAIG
LGTLFGIVVI IGLILLWARR LTKPEVKSFT FADDWFALVL ITAIVLVGLV NTAVIHPHYD
KTVTPWLQNL LTGNVAAALE AITKAEPLVK LHIFLAEVLM IYVPFGKMIH PFTIFFEPTI
TSPPYKVSGS EVILK