Gene Pisl_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0113 
Symbol 
ID4617516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp106854 
End bp107966 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content54% 
IMG OID639783195 
Productradical SAM domain-containing protein 
Protein accessionYP_929639 
Protein GI119871632 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.389414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGAGG TTAAGAAGCT CATTGAGAGG TTTCACAGCG CTCCCCTCAT CGTGTTTTGG 
GAATCTACCA AGGCCTGCCC CCTTGCCTGT AAACACTGTA GGGCAGACGC GATACTGAAG
CCGTTGCCCG GGGAGTTAAA CACAGAGGAG GGGAAGAGGC TTATTGAACA AGTGGCGTCT
TTTGGCGACC CCAAGCCGCT ACTAGTGATC ACAGGGGGAG ACCCCCTTAT GAGAAACGAC
TTGTTTGACC TCATTGACTA CGCAAACCAG CTGGGTGTCC CCACGTCGCT TGCCCCAGCC
GTCTCGCCTA ACTTAAACCA AGAGGCGCTT AAAGCCGTTA GAGAACACGG CGTCAAGTCT
ATTTCTATCA GTTTAGACGG CGCCAGAGAG GAGACACATG ACGAGCTGCG GGGGGTCGCT
GGAAGTTTTC GCGACACTGT GGCAGTTATA AAAACGGCAG TTGACATGGG GATACAAGTC
CAGGTAAATA CTGTCGTTTG GAGAAAGTCT CTAACCGAGC TTCCAGAAGT TGCCAAGTTA
ATTACAGACT TGGGAGTGAG GACGTGGGAG GTCTTCTTCT TAATAGTCGC CGGCAGGGCA
AAAGAGGAGC TCGACATCAC GCCGGAGGAG TACGAAGCGG CTGTGCAGTT TCTCGTAGAC
GTCTCTACAT ACGGCCTACA AGTGAGGACT GTGGAAGCGC CGTTTTATAG AAGGGCAAAG
TTGGAGAGAC TAGAGGGCAA GACCTACGAC AGCCCGCTAT ATAGAAAGCT GGTAGGGCGT
CTCAGGGAGC TGATGGGCCC GCCCAGAAGG GGGATCGACC CTACCATAGT CCCCACACGT
GACGGCTTTG GCATAATCTT CGTCGCTTAC GACGGCACTG TATATCCAAG CGGCTTCTTG
CCCTACCCCC TGGGAAACGT CAGAAGACGG AGCCTGGTGG AGATATATAG AGAGCACCCA
CTCCTCCAAA AGATGAGACG CGGCGAATTC GGCGGGAGAT GCGGCGTCTG CAAATACAAA
GACATATGTG GGGGCTCAAG GGCAAGGGCC TTCGCCTATT TCAAAGACCC ACTAGCAGAG
GATCCAGCAT GCATCTACAG CCCCCCTTTG TAG
 
Protein sequence
MREVKKLIER FHSAPLIVFW ESTKACPLAC KHCRADAILK PLPGELNTEE GKRLIEQVAS 
FGDPKPLLVI TGGDPLMRND LFDLIDYANQ LGVPTSLAPA VSPNLNQEAL KAVREHGVKS
ISISLDGARE ETHDELRGVA GSFRDTVAVI KTAVDMGIQV QVNTVVWRKS LTELPEVAKL
ITDLGVRTWE VFFLIVAGRA KEELDITPEE YEAAVQFLVD VSTYGLQVRT VEAPFYRRAK
LERLEGKTYD SPLYRKLVGR LRELMGPPRR GIDPTIVPTR DGFGIIFVAY DGTVYPSGFL
PYPLGNVRRR SLVEIYREHP LLQKMRRGEF GGRCGVCKYK DICGGSRARA FAYFKDPLAE
DPACIYSPPL