Gene Pisl_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0088 
Symbol 
ID4617017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp82953 
End bp83375 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content61% 
IMG OID639783169 
ProductNUDIX hydrolase 
Protein accessionYP_929614 
Protein GI119871607 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.856049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG ACGAGGTGTC GGCGGGCGCC GTGGTATTCT ACAGGGGGGA AGAGGTGGAG 
TACCTCCTCC TCCACTACCC CGCGGGCCAC TGGGACTTCC CCAAGGGCAA CGTAGAGCCG
GGGGAGACGC CGGAGCAGAC AGCGCTGAGA GAGATCAGGG AGGAGACGGG GCTGGAGGTG
GAGCTCATCC CTGGCTTTAG AGAGGAGGTG GAGTACGTCT ACACCAGAGG GGGGAGGAGG
GTGAGGAAGA AGGTCATATT CTTCTTGGCG AGGGCTAAGT CTAAGGAGGT CAAGCTGAGT
TGGGAGCACA CAGGCTACGC TTGGCTCCCC TTCGACAAAG CCTTGGCGAG AGTGACCTAC
GAGACGTCCA GGCGCGTCCT TGCCAAGGCG CACCGCCACG TAAAAACACT GGATGGCGTG
TAA
 
Protein sequence
MEYDEVSAGA VVFYRGEEVE YLLLHYPAGH WDFPKGNVEP GETPEQTALR EIREETGLEV 
ELIPGFREEV EYVYTRGGRR VRKKVIFFLA RAKSKEVKLS WEHTGYAWLP FDKALARVTY
ETSRRVLAKA HRHVKTLDGV