Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0080 |
Symbol | |
ID | 4617029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 76737 |
End bp | 77858 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639783162 |
Product | hypothetical protein |
Protein accession | YP_929607 |
Protein GI | 119871600 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCCAG ACCTCGCTAG GCTGGCTTGG CAGTCTGTCA GAGAGAGGGC GGGGAGGTCG GCACTTGCGG CTATGGGCGT CTTCGTGGCC TTTCTGGCGC TGGCCGTGGC GCTGTCTGTG GGGGAGATGG CGAAGTCGGC TGTGGAGTCG GCCTTCCAGC AGCTGGGCCT AAACACGGTG TGGGTTATGG CCCAGAGGGG TTATTTCACG GAGGCAGACG CGGCCACAGC TACGGCTGTG GCGAAGGAGG GGGTGGTGAT ACCCATAGCA CAGGACTTTG GAAGACTCAG GCTGCCAGAC GGGACGGAGC GTGCCGTGAC GGTGTACTAC ATTCCGCCTC AGTACCTAGG GCTCCTCCTG CCTAAGGAGG CTTTGAGAAG CGGCCAGCTC TACGTCGGAG GGCCCTTGGT GATGGTAAAC AGCCGCGTTC GTACGGCCGG CGATATGCCG GTAGCGCCCG GGTCCCCCAT GACGTTGACG AGAAGCGACG GAAGTGTCGT CGAGGTGGTG GCGGCGGGCG TCTTCGAGTC GACGGGCTTT ATCGGGGCCG CAGACGTGTT GGCAGACAAC GCCCTGTACC CAGAGAGGAG GTATATAATC CTCTACATAG TGGCCAGGAG CCCCCAGGCC GCCGAGGCGC TGGCCCAGGC GCTGAGGCCC TACTTCCCAG ACGCCGTGGT GATTACGCCT CAAACTCTGG CTAGGCAAAT CGGCCGGCTG GCCTCTGTTG CACAAATCGG CCTTGGGGCG CTGGCGGGCA TCAGCTCGTT GGTCACCGCG ATGTGGCTCT ACGACACTGT GACAATATCT ATCCTCCAGA GGACTAAAGA GATAGGCATC ATGCGTGCAG TGGGGTTCAA GAGGAGACAC GTCATGGCTA TGCTACTGCT GGAGACCTTC ATAGTGGTGG GGGCGGGCGT ACTTGCGGCG CTTCCCATAT TGGCCGCGGC CTCAGCTATC CCAATATCGC TAGGCCCCGG CGTATACCTC AAGTTGGCCA TCTCGCCTAT TGCGGTGGGG GCGGCTGCCG CCGTGGTGAT CGGCGCCAAT ATCCTCGGCG TACTCGTCCC CGCTTATAGA GCCAGTAGAC TCAATATTGT CGACGCTCTG CGCTATGAAT AG
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Protein sequence | MLPDLARLAW QSVRERAGRS ALAAMGVFVA FLALAVALSV GEMAKSAVES AFQQLGLNTV WVMAQRGYFT EADAATATAV AKEGVVIPIA QDFGRLRLPD GTERAVTVYY IPPQYLGLLL PKEALRSGQL YVGGPLVMVN SRVRTAGDMP VAPGSPMTLT RSDGSVVEVV AAGVFESTGF IGAADVLADN ALYPERRYII LYIVARSPQA AEALAQALRP YFPDAVVITP QTLARQIGRL ASVAQIGLGA LAGISSLVTA MWLYDTVTIS ILQRTKEIGI MRAVGFKRRH VMAMLLLETF IVVGAGVLAA LPILAAASAI PISLGPGVYL KLAISPIAVG AAAAVVIGAN ILGVLVPAYR ASRLNIVDAL RYE
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