Gene Pisl_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0061 
Symbol 
ID4617282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp56646 
End bp57761 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content55% 
IMG OID639783143 
Producthypothetical protein 
Protein accessionYP_929588 
Protein GI119871581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.97324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGT TGTTTGTTTT AGTGGTGCTT GCCGCGGCAC TTTACGCCCA ACAGGTTGTC 
CGCGTGGTTT ATCCCCTGCA ACTCCCACCT GCAGACATTT TCTCTCTGTA TGTGGATTTC
AAAAAGGCGG TACCTATATG TCCCCCATAC TGCAACAATA CTGAGATTGT ATCCGTAACT
CTAAATGGGG TACTTGACGT GAGAAGCGGA GGCGGCTACA GCGTTGTGCT TTACTACGAC
AGAGGAGGGG GGTGGAGAGC CTTGTGTACT CTGCCGGTTG TGCACAACGC CTTCTCTGGC
TCATGCGCCG TGCCAAGCGA CGCCAAGAGC TTAGGCATAG CCCTCTGGCA AGGCGGCAGG
TGGCTCCAGA GCGTCGATAT ACACAACCTG AGGTTTTGGA CAGCATGTCT ATGTGTCCCA
AGGCCGCCTA CTATAGAGGG CGTGGATCAC CCGTCTGTGG CTAAGGTGGG CGAGGACGTC
AGATTCCACG TCTGGCTAAA CTGGTGCGGC AACCGCCAGG AGGAGGTCAG ACTCCAAATC
GGCGGCGTCG AAGTTGTTAA AAAGGCGAGC ATAAATTACA CATGCCCATT GAGAGTCAGA
GTCGACTTCG GGCCCTTCCG CTTTGAAAAA CCGGGCGTAT ACAACTGGAC GGTGAGGACA
CAAGCCGACG TACGCTCTGG CTCTATTAAG ATAGAGGATG TTAAGGTCTG TCCCCCAATC
CTGTGGCCGC CGAGGATAAT TAACTACTCC GTCCCCAGCG TTGTGTACGT CGGCGAGCCG
TTCGACGTCA AAGCCGTTGT TGAGGGGAAT GTGCCAGCCC TCGTCGTGTT TAGGCTTGGT
AATACCACGA CAAGCCGCTA TGTAGAGTTG GGAAAGGACG GATGTGTAGA GAAGAGGGAG
ATAGTCTTCA AGCCGCCTCC CCTCAGCAGG CCGGGGACAG AGTCGTGGAC GATAGAGGTG
TGGATGAATA GAACGAAAAC CGACGAGAAG CGGGGGGTGC TTGAGGTGAG GAGTAGGTGT
AGCCCGAGGG TCTCGGTGGA GGGCCCACAG CGCGTCTACC TCGGGTCGTC TTTTAACATG
ACCCCGGCAA CTGTGGAGTT AGCGGCGGCG AGCTGA
 
Protein sequence
MRWLFVLVVL AAALYAQQVV RVVYPLQLPP ADIFSLYVDF KKAVPICPPY CNNTEIVSVT 
LNGVLDVRSG GGYSVVLYYD RGGGWRALCT LPVVHNAFSG SCAVPSDAKS LGIALWQGGR
WLQSVDIHNL RFWTACLCVP RPPTIEGVDH PSVAKVGEDV RFHVWLNWCG NRQEEVRLQI
GGVEVVKKAS INYTCPLRVR VDFGPFRFEK PGVYNWTVRT QADVRSGSIK IEDVKVCPPI
LWPPRIINYS VPSVVYVGEP FDVKAVVEGN VPALVVFRLG NTTTSRYVEL GKDGCVEKRE
IVFKPPPLSR PGTESWTIEV WMNRTKTDEK RGVLEVRSRC SPRVSVEGPQ RVYLGSSFNM
TPATVELAAA S