| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0054 |
|---|
| Symbol | |
|---|
| ID | 4616739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 48082 |
|---|
| End bp | 48978 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639783135 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_929581 |
|---|
| Protein GI | 119871574 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGC CGTCTACAAG CGCAAATCTA GGCTCTGGAT TTGATGTAGT GGCTGTGGCT
CACGACGCAT ATTTCGCCGA GGCGTATATA AAACTGACGT CTGGATGCGG CGTAGATATA
AAGTTCCGGG GGTTTAACCC AGGGAGTGAC AACACAGTGA AGAGGGCCTT CCAACACCTC
TTCGAGAGAC TGGGCAGATG TTGGGGAGTT GAGGCGGAGG TGGTAAATAA CATCCCCATC
GCCAGAGGTT TGGGGAGTAG CGGTGCGTCG GCGGTGGCGG CTTTGGCGGC TTTTATACGG
GAGGCCGGCC TTAGGGTGGA GCCCGCCGTT GTGGTAGAAG CAGCTGGGCT GGGGGAGGTC
GCGGCGGCCG GCAGTCCGCA TTTTGACAAC GTGGCGGCGG CGGCGCTGGG CGGCGCTGTA
GTTATCGCCT CCGTCAAGCC TCTGGAGTTG GTTAAATTTA TGCCAAAGCT CATATTTGTA
ATCGGCGTGC CAGACGTCCC CCCTATGCCA GAGAAGACAA AAGTCATGAG GAGCGTCCTC
CCCAGAGAGG TGTCTTTTAG AACCTACGTG GCGCAGTTGG CAAGAGTCTC TGCGCTAGTC
GCCGGCTTTG CAAAATCAGA TCCAAGACTT GTGGCCCTCG GAATGAGTGA CGAAGTAGTC
GAGCCGGCTA GAGCGCCTTA TGTACCAGCC TACGGCAGAG TCAAGAGGTA TGCGCTAGAG
GCCGGGGCGC TGGCCGTGTC CATATCGGGG GCCGGCCCCT CTATAATCGC CCTTGTGGAA
GAGAAAAATA GCGACGTAGT AAAGGCAGCT GTAGAGAGGG CTTACATAGA GGAGGGCTTG
AGAGCAGAGG TCAAGGTGGC ATCAATAACA GAGGGCGCTC TGGCGCAAAA TATATAA
|
|---|
| Protein sequence | MRAPSTSANL GSGFDVVAVA HDAYFAEAYI KLTSGCGVDI KFRGFNPGSD NTVKRAFQHL
FERLGRCWGV EAEVVNNIPI ARGLGSSGAS AVAALAAFIR EAGLRVEPAV VVEAAGLGEV
AAAGSPHFDN VAAAALGGAV VIASVKPLEL VKFMPKLIFV IGVPDVPPMP EKTKVMRSVL
PREVSFRTYV AQLARVSALV AGFAKSDPRL VALGMSDEVV EPARAPYVPA YGRVKRYALE
AGALAVSISG AGPSIIALVE EKNSDVVKAA VERAYIEEGL RAEVKVASIT EGALAQNI
|
|---|
| |