Gene Pisl_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0049 
Symbol 
ID4616790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp44006 
End bp44341 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content49% 
IMG OID639783130 
Producthypothetical protein 
Protein accessionYP_929576 
Protein GI119871569 
COG category[S] Function unknown 
COG ID[COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATAA AATGGCTTGA GAGACATACT AGACATTTCC AACAGGCGCT AGCCGCTTTT 
GAAACTGGCG ATGAAGCCGC CGCGTGTTAT AACGCCTATG TTTCTATAGA GGCTCTTATA
AAGGGAGCCC TCGGATTTGA CCCATACGGC GAAGTTCATA ACGTCAAGCG ACTCCCCGCT
CTTGTAAGAG AGGCGTTTAG AGGCCAGCCG CCTAGAGATG TGGAAAAATG CGCCTACTGT
CTCGAGAGAC AAGCGTTTTC TGGAGACGGC GCAACTTGTA TAAAATGCGC CGAGTTGATA
AGTGAGGCAA TATACCAATT GCTAGGGCGT GGCTAA
 
Protein sequence
MHIKWLERHT RHFQQALAAF ETGDEAAACY NAYVSIEALI KGALGFDPYG EVHNVKRLPA 
LVREAFRGQP PRDVEKCAYC LERQAFSGDG ATCIKCAELI SEAIYQLLGR G