Gene Pisl_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0042 
Symbol 
ID4617705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp37219 
End bp38229 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content59% 
IMG OID639783123 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_929569 
Protein GI119871562 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0725426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC CAACTGTCAG ACCCCGCCGC CTCAGGACAA ACAAAATCAT TAGAGACGCC 
GTTGCCGAAA CTGCCCTCGA CCCCAGCGAC TTCATCTACC CCATCTTCGT CAAGGAGGGC
CCCGGCCGAG AGGCCATACC CACCATGCCC GGCCAACACC GGTGGCCCGT CGGCGAGGAG
CTAATTAAAC ACGTAGAGGA GGCCCTCGCC CTAGGAGTCA ACAAGTTCAT CCTATTCGGC
GTGGTGCCAG AGGAGCAGAA AGACCCCCAC GGCTCCAGGG GCTACGACCC AGAGGGCCCC
GTCCCCAAGG CCCTCCGCCT CCTAAAAGAG ACCTTCGGCG ACAAGATACT CCTCTTCGCA
GACGTCTGCC TCTGCGAATA CACAGACCAC GGACACTGCG GCGTGGTAAA GACCACCGGC
GGCAGGTGGC ACATTGACAA CGACGAAACT ATAAAGCTAT ACGCCAAGGA GGCCCTCGTG
TACGCAGACG CCGGCGCTGA CTTCGTCGCC CCAAGCGGCA TGATGGACGG CCAAGTGGCC
GAGATCAGAA AAGCCCTAGA CGCCCACGGC TTCCACCACG TGGGCATCAT GGCATACAGC
GCCAAATACG CCTCAGCCTT CTACGGCCCC TTCCGCACAG CCGCCGCCTC AGCCCCCAAA
TTCGGCGACA GGAGGACATA CCAGATGGAC CCCAGAAACG CCCACGAAGC CCTCAAAGAA
GTCGCCATGG ATCTGGAGGA GGGCGCAGAC ATAGTCATGG TAAAGCCAGC CCTCGCATAC
CTAGACGTAA TCCGCCTAGT AAAACAGCAC TACCCCTGGG CCCCCCTAGC CGCCTACAAC
GTCTCCGGAG AATACGCCAT GGTAAAAGCC GCCGCAGCCG CCGGATATAT AGACGAGAGG
GTCGTCACAC TAGAAATCCT AACCGCAATA AAAAGAGCAG GCGCAGACCT AATCCTCACC
TACCACGCCC CAGAAGCCGC AAAATGGCTA AAAGACGGCA CCCCATTCTA G
 
Protein sequence
MKFPTVRPRR LRTNKIIRDA VAETALDPSD FIYPIFVKEG PGREAIPTMP GQHRWPVGEE 
LIKHVEEALA LGVNKFILFG VVPEEQKDPH GSRGYDPEGP VPKALRLLKE TFGDKILLFA
DVCLCEYTDH GHCGVVKTTG GRWHIDNDET IKLYAKEALV YADAGADFVA PSGMMDGQVA
EIRKALDAHG FHHVGIMAYS AKYASAFYGP FRTAAASAPK FGDRRTYQMD PRNAHEALKE
VAMDLEEGAD IVMVKPALAY LDVIRLVKQH YPWAPLAAYN VSGEYAMVKA AAAAGYIDER
VVTLEILTAI KRAGADLILT YHAPEAAKWL KDGTPF