Gene Pisl_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0038 
Symbol 
ID4618201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp34482 
End bp34907 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID639783119 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_929565 
Protein GI119871558 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTC CGCCCTGGGC GTTTATATCG AGGAGGGGGC TGAGGGAGGT AGTGCTCTGG 
TTGCTCTCAG ACAAGCCTAT GAACGGCGCC GAGGTTATAA GAGCTGTGGA AGAGCTCACG
TGGGGCTTTT GGAAGCCGTC TCCCGGCTCG GTCTACCCGC TGTTGAAACA ACTCGAGGCG
GAGGGTCTGG CCAAGAGGAG AGAAGACGGG CGGTACGAGC TGACGGAGGC CGGCAGACGC
GCCGTCAAGC TCATACCCTG GGCTAAAATA CCTAGGCCCG GCGCCCCGCG GAATATCGAA
GAAGTTGTCG AAGAGTTGGA GAGCTGGTCG ATGTATCTCG CCGACGTCGC TACTACAGAG
CCTGATAGAA TAGCGCCGTA TAGAGAGCGT ATTAGAAAGA TAGCTGAGAT TCTCCAAAAG
GTGTAG
 
Protein sequence
MAPPPWAFIS RRGLREVVLW LLSDKPMNGA EVIRAVEELT WGFWKPSPGS VYPLLKQLEA 
EGLAKRREDG RYELTEAGRR AVKLIPWAKI PRPGAPRNIE EVVEELESWS MYLADVATTE
PDRIAPYRER IRKIAEILQK V