Gene Pisl_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0036 
Symbol 
ID4616750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp32578 
End bp33774 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content54% 
IMG OID639783117 
ProductSufBD protein 
Protein accessionYP_929563 
Protein GI119871556 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGC AGGGCTGGTT TGAAAAAATA AGAGAGAGAG CTAAAGCGGC GTTAAACAAG 
CCGGCTCCCC ACGGCCCAGA TGTCGATGTT ACACAGTTTG GCGACGGGAG GACGCCCACT
AGTGAGGAGG CTGTGGTTGC AGTCGCGAAT AAAGTCGGCG TGTCTATGGG AGCGCCGGCT
TACTACATAC AGGGAGATAG TGCATATTTC AGATACTTAA GTAGGATCCC GGGGGTCGAG
GTGTATAGAG TAGAGGAGTT TGCCGACGCA TATCCAGACC TCGCCAGGGA GTACCTCTGG
CGTCTTGTGC CGCCTGACCT TGATAAATAT ACAGCTGTAG CAGCTCTAAG GGGGGTTGGG
GGATATGTGA TTAGAGTCAA GGCGGGGGCT AAGGTGAGAG ATCCTATCCT CGCCTGTCTT
TCTATCGTCC GGGGGGGTCT CCAGGCGCCG CACAACGTCG TTATTGTAGA AGAGGGGGCT
GAGGCGGTGG TCTACACTGG GTGTGTAATT GCACCGGAGG TCGTGGGGCT ACACGTGGGG
ATTTCTGAGT TTTACGTATT AAGGGGGGCC AAACTCCGTT ATATAATGGT ACATAACTGG
ACGAAGGCGG CGCATGTAAG ACCTCGCACG GGGGTTCTCG TAGAGGAGGG CGGAGAGTAC
GTCGGATATT ATGCCAATCT CCAAGAGGTG AACTCCCTCC AGACGAGTCC GAGGATTGTG
TTGAGAGAGG GGGCGAGAGC CCACGCGACT TCTATACTCC TGGGGCTGGG GAGTGCGCAG
ATTGACGTGG GGACGACGGC TGTATTGGAA GGCGACGGGG CTGCAGTTGA GTTGACCACG
AGGGCGCTTG CGACAGACAG ATCTAACATC ACCATGAGGG CTTTAGTCGA GGCGCATAAG
CTCTCTAGAG GCCATGTTGA GTGTAGCGGC CTTTTACTCT CCGGCAGTGC CAACATAGTC
ACCATCCCAC AGCTGGCGGC TTATCACCAA GACGCGATGT TGACACACGA AGCCTCTATT
GGGAGACTGG CTGAGGAGGA GATAAACTAT CTACAGGCCA AGGGCTTTAC CTACGAAGAG
GCTGTGTCTC TATTAGTGAG GGGGTTTGTC ACTACAGATA TACACAGATA TCTGCCAGAG
CAAGCAAGGC GGTATGTAGA GAGTATTGAA AAGGTTATAG TTGAGAAGGC AATGTGA
 
Protein sequence
MASQGWFEKI RERAKAALNK PAPHGPDVDV TQFGDGRTPT SEEAVVAVAN KVGVSMGAPA 
YYIQGDSAYF RYLSRIPGVE VYRVEEFADA YPDLAREYLW RLVPPDLDKY TAVAALRGVG
GYVIRVKAGA KVRDPILACL SIVRGGLQAP HNVVIVEEGA EAVVYTGCVI APEVVGLHVG
ISEFYVLRGA KLRYIMVHNW TKAAHVRPRT GVLVEEGGEY VGYYANLQEV NSLQTSPRIV
LREGARAHAT SILLGLGSAQ IDVGTTAVLE GDGAAVELTT RALATDRSNI TMRALVEAHK
LSRGHVECSG LLLSGSANIV TIPQLAAYHQ DAMLTHEASI GRLAEEEINY LQAKGFTYEE
AVSLLVRGFV TTDIHRYLPE QARRYVESIE KVIVEKAM