Gene Pisl_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0013 
Symbol 
ID4617428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp10441 
End bp11241 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content52% 
IMG OID639783094 
Producthypothetical protein 
Protein accessionYP_929540 
Protein GI119871533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.80548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG CAGCGTATAT AGTGTTGGCA GTTTTAATCA TAGGGGCGGC GCTCTATTTT 
ATACACACAG CGCCGAGACA CGGGCTTGAG ACAATTTCGA CGTCACAACT GCCTACTACA
ACTACGACGC AGACAAGCCC GGCGGTCAAC ACGCCTGCCG TCGGCGCCGT GCGGCCGTCA
TTCGACATTA AAAACTACGA GGTTAACTAC ACTGTTGTAA TCACTGTGGC AGTAGGCGAC
GTGTCGATAA GTATGAGGGG CTGGTCTGTA GAGGGCTCTG GGGCTCTCGG CAATTATAGC
TTCGGCGAGC TTTATGCAAC TGTCCCGCCG CACGGCCCCA TCAAACTTGT GTTTAAAGTT
GCAACAGAGG GGAGGGTCGC CTATATTGTA ACTTGCGCAG GGGGGCAGTG TCAAACTGAA
GTCAGGCCGG CCAATTACTC TACGATTTAT CTACTGAGGG GAGTTGAAAC GTCTAGAGTT
GAGAAGGGGC CTTGTACATA TTTAGGCTAC GGCGGGGTTG AAGTAGAGGA GCGCGGCCGT
ATATCACAAG AGGCCGTGGC CCAGATTTTG GGAAATCTCG CTGGGAATGG CACAGGCGTA
TATACGACAA AGATATGTGA AGTAAATGGA GTGCCTTTAA AGACGGCGGG AACCGCCTAT
TTAAATATCA CTGTATACGG CCAGAGGCTA GCGCTCACAG TTTCTATAGA GTCCGCCGCC
GTCTCCGCAG GCCCCTTTAA CGAAGATAGA TATAGACAAG TGCTTAGAGA GACAAAAGCC
GCCCAGACCG CCAAGGCTTA A
 
Protein sequence
MRKAAYIVLA VLIIGAALYF IHTAPRHGLE TISTSQLPTT TTTQTSPAVN TPAVGAVRPS 
FDIKNYEVNY TVVITVAVGD VSISMRGWSV EGSGALGNYS FGELYATVPP HGPIKLVFKV
ATEGRVAYIV TCAGGQCQTE VRPANYSTIY LLRGVETSRV EKGPCTYLGY GGVEVEERGR
ISQEAVAQIL GNLAGNGTGV YTTKICEVNG VPLKTAGTAY LNITVYGQRL ALTVSIESAA
VSAGPFNEDR YRQVLRETKA AQTAKA