Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0002 |
Symbol | |
ID | 4616623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1869 |
End bp | 2660 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639783082 |
Product | hypothetical protein |
Protein accession | YP_929529 |
Protein GI | 119871522 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.246824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTTTTT GTTTTGTTGT GGCTGTTGTG GCTTTGTTAA CGGATTTTGG GTTTAGGGAC TATTTTGTGG CTGTTATGAA GGGGGTTATA CTTTCTATAA ATCCTGGGGC GCGTATCGTC GATATTACTC ACGAGGTGCC TCCGCAAGAT GTTTTTACCG GCGCTTTTAT CCTTAAGGCG GCTTATAGGT GGTTTCCGCC TGGCACGATT TTTGTCGCTG TGGTAGACCC TGGGGTTGGC ACTGAGAGAG CTCCCCTTAT TTTAAAGACG AGGAGGTATT TCTTCGTAGG TCCTGACAAC GGCCTTTTGG CTCCTGCTGC TGAGGAAGAC GGCGTGTTAG AGGCGTATAG GATTGAGGTG AGGCTTCCAC AGCTCTCGTC GACGTTTCAC GGCCGAGACG TTTTTGCGCC TGCGGCGGCC TATCTGTCGC TTGGCGTAGA GCCGCGCCTC ATTGGGTCTC CTATTTCGCA GTGGAAGAGG TTGGAGATTC CAGAGGCGCG TGTTGTAGAC GGCGTTGTGT ACAGCCGCGT TGTGTATATA GATAGGTTTG GCAATGTATA TACATCTGCG AGAAGTCTCC AGGGCGTGTC GTATGGAGAG GTTATGTGTG TAGAGACGCC TAGGGGCGTC CTCAGGGCTA GATATGTAGA GACCTATGGC AGAGTTTCGC CGGGGGAGGC GGTCTTGCTT ATAAACAGCG AGGGGTATCT AGAGCTTGCG GTCGCAATGG GAAACGCCGC CGCTACATAC GGCTTGAGGC CGGGAGATGA GATAAAAATC TACAGGTGTT AA
|
Protein sequence | MGFCFVVAVV ALLTDFGFRD YFVAVMKGVI LSINPGARIV DITHEVPPQD VFTGAFILKA AYRWFPPGTI FVAVVDPGVG TERAPLILKT RRYFFVGPDN GLLAPAAEED GVLEAYRIEV RLPQLSSTFH GRDVFAPAAA YLSLGVEPRL IGSPISQWKR LEIPEARVVD GVVYSRVVYI DRFGNVYTSA RSLQGVSYGE VMCVETPRGV LRARYVETYG RVSPGEAVLL INSEGYLELA VAMGNAAATY GLRPGDEIKI YRC
|
| |