| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3655 |
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| Symbol | |
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| ID | 4605902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4303877 |
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| End bp | 4305766 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639783080 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_929527 |
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| Protein GI | 119776787 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.356359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000878533 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATTTC ATGAACGGTT TGATGTGATA GTAGTAGGTG GCGGTCATGC CGGTACCGAA
GCCGCCTTGG CTGCAGCCCG TATGGGATGC AAGACACTGC TGCTCACCCA CAATGTCGAT
ACCCTGGGTC AGATGTCCTG TAACCCTGCC ATTGGCGGTA TTGGTAAAGG ACATCTGGTA
AAAGAGATAG ATGCGCTGGG TGGTGCAATG GCGATCGCCA CCGATTTTTC AGGGATCCAA
TTCCGTACCC TGAATTCCAG CAAAGGTCCA GCGGTCAGAG CGACCCGCGC TCAGGCCGAC
AGAGCGCTCT ACAAAGCCAA GATCCTGAAT ATTCTGCAGC ATCAGCCTAA CCTGCGGATT
TTCCAGCAAG CCGTAGATGA TTTGGTGGTA GAGAATGGTC GGGTTATCGG CGCTGTTACC
CAAATGGGAC TGGCCTTTGA AGCACCAGCC GTGGTGCTGA CAGCCGGTAC CTTCCTGGGA
GGCAAAATTC ACATAGGTCT GGAAAATTAC AGCGGTGGCC GCGCTGGCGA CCAACCAGCC
ATCGCCCTCG CCCATCGCTT ACGGGATCTG CCTCTGCGTG TAGGCCGTCT GAAAACCGGC
ACGCCTCCCC GTATTGATGC CAGAACCATT GATTTTTCAG TGATGACAGA GCAAAAAGGC
GATACGCCCT TGCCTGTGAT GTCATTTATC GGTGATCTGA GCCAACATCC AGAGCAGATC
TCCTGCTACA TCACTCACAC CAATGAACAA ACCCACGACA TCATTCGTGG TGGATTGGAT
CGCAGCCCCA TGTATTCCGG GGTGATCGAG GGTATTGGCC CGCGTTATTG TCCGTCTATT
GAAGACAAAA TTCATCGTTT TGCCGACAAG AACTCTCACC AGATCTTTAT TGAGCCCGAA
GGCCTGACGA CAACCGAAAT TTACCCGAAC GGGATTTCCA CCAGCTTGCC ATTTGACGTT
CAAATTCAGT TAGTTCGCTC TATTCGAGGC ATGGAACAGG CTGAAATAGT TCGTCCTGGC
TATGCCATTG AATATGACTA CTTCGATCCA AGAGATCTGA AAAACTCGTT GGAAACCAAG
GTTATCGACG GTTTGTTCTT TGCCGGACAG ATTAACGGCA CCACAGGTTA CGAAGAAGCC
GGCGCCCAGG GGCTGCTGGC CGGTCTCAAC GCCGCACTGC AGGTACAGGG CAAAGAAGCA
TGGGCACCTC GCCGCGATCA GGCTTATCTG GGGGTGCTGG TGGACGATCT CTCCACTTTG
GGTACCAAAG AGCCCTATCG TATGTTCACC AGCCGCGCCG AATACCGTTT GCTGCTGCGT
GAAGACAATG CCGATTTGCG TCTGACCGAA AAAGGTCGTG AACTGGGCCT GGTTGATGAC
TTCCGCTGGC AAAAATTCAG TGAAAAGCGC GAGTCCATCG AGCTTGAACA GCAGCGTTTG
CGCGGCCAGT GGGTACATGT GAATTCACCT CAGGTGGCAG AGCTTAATGA AGTGCTCAGT
GCCCCACTGA CCCGCGAGGC GTCACTGGAA GATCTGCTGC GCCGACCTGA AATTGAATAC
GACACCCTGA TGAAGGTTGA CGGATTCGGT CCAGGGCTTG CCGATCCTCT GGCGGCAGAG
CAGGTGCAGA TCCAGGTTAA ATACGCCGGT TACATCCAGC GCCAGCAGGA TGAAATCGCC
AAGGCTGAGC GTAACGAAAA CACCCGCTTA CCGCTGGATC TGGACTACAG CGAAGTGCCG
GGGCTGTCCA ACGAAGTGAC GGCCAAGCTC AATGCGCACA AGCCAGAGAC CATAGGTCAG
GCCTCTCGTA TCTCAGGAGT GACCCCCGCA GCCGTTTCCA TTCTGCTGGT TCACCTGAAA
AAACGTGGAT TGTTGAGAAA GAGCGCTTAA
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| Protein sequence | MQFHERFDVI VVGGGHAGTE AALAAARMGC KTLLLTHNVD TLGQMSCNPA IGGIGKGHLV
KEIDALGGAM AIATDFSGIQ FRTLNSSKGP AVRATRAQAD RALYKAKILN ILQHQPNLRI
FQQAVDDLVV ENGRVIGAVT QMGLAFEAPA VVLTAGTFLG GKIHIGLENY SGGRAGDQPA
IALAHRLRDL PLRVGRLKTG TPPRIDARTI DFSVMTEQKG DTPLPVMSFI GDLSQHPEQI
SCYITHTNEQ THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFADK NSHQIFIEPE
GLTTTEIYPN GISTSLPFDV QIQLVRSIRG MEQAEIVRPG YAIEYDYFDP RDLKNSLETK
VIDGLFFAGQ INGTTGYEEA GAQGLLAGLN AALQVQGKEA WAPRRDQAYL GVLVDDLSTL
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KGRELGLVDD FRWQKFSEKR ESIELEQQRL
RGQWVHVNSP QVAELNEVLS APLTREASLE DLLRRPEIEY DTLMKVDGFG PGLADPLAAE
QVQIQVKYAG YIQRQQDEIA KAERNENTRL PLDLDYSEVP GLSNEVTAKL NAHKPETIGQ
ASRISGVTPA AVSILLVHLK KRGLLRKSA
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