| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3644 |
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| Symbol | |
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| ID | 4605891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4294701 |
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| End bp | 4296089 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639783069 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_929516 |
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| Protein GI | 119776776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0562091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000849017 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACAG GTACTGTTGT CCAAGTAATT GGCGCGGTTG TGGACGTAGA GTTTCCACAG
CATGCCGTAC CTCAGGTATA TGACGCTCTG AAGATCACAG GTGAAGGTAC CTGTAACGGC
CTGGTGCTGG AAGTTCAGCA GCAGCTCGGT GGCGGTGTGG TTCGTACCAT CGCCATGGGT
TCTTCCGACG GTCTGCGTCG TGGTATCGAG GTTGAAAACA CTGGTTCCGC TATTGCCGTT
CCTGTTGGTA AGGCCACTCT GGGTCGTATC ATGAACGTGC TGGGCGAGCC TGTGGATGAA
GCGGGTCCTA TCGGTGAAGA AGATCGTTAT GTTATTCACC GTGCCGCTCC TTCCTATGAA
GAGCAGTCAA ACACAACTGA ACTGCTGGAA ACCGGTATCA AGGTAATCGA CCTGGTATGT
CCATTCGCTA AGGGTGGTAA AGTAGGTCTG TTCGGTGGTG CGGGCGTTGG TAAGACAGTT
AACATGATGG AACTGATCAA CAACATCGCC AAGGCCCACT CTGGTCTGTC AGTATTCGCC
GGTGTAGGTG AGCGTACCCG TGAAGGTAAC GACTTCTACT ACGAAATGAT GGAATCAGGC
GTACTGGACA AGGTAGCCAT GGTGTACGGT CAGATGAACG AGCCACCAGG AAACCGTCTG
CGTGTGGCCC TGACCGGTCT GACCATGGCC GAGAAGTTCC GTGACGAGGG TAAAGACGTA
CTGTTGTTCG TAGACAACAT CTACCGTTAC ACCCTGGCCG GTACCGAAGT ATCAGCACTG
CTGGGCCGTA TGCCATCAGC CGTAGGTTAT CAGCCTACTC TGGCTGAGGA GATGGGCGTT
CTGCAGGAGC GTATTACTTC TACCAAGACT GGTTCTATTA CCTCCGTTCA GGCGGTATAC
GTACCAGCGG ACGACTTGAC CGACCCAAGC CCAGCGACCA CCTTCGCCCA CTTGGATGCG
ACCGTGGTAC TGTCTCGTCA AATCGCTTCT CTGGGTATCT ACCCAGCGGT TGACCCACTG
GATTCCACCT CTCGTCAGTT GGATCCACTG GTAGTTGGCC AGGAGCACTA TGACGTGGCT
AACGGCGTTC AAAACGTTCT GCAGCGCTAC AAAGAGCTGA AAGACATCAT CGCCATCCTG
GGTATGGACG AACTGTCAGA CGACGACAAG ATGACAGTAT CCCGCGCCCG TAAGATTGAG
CGTTTCCTGT CTCAGCCTTT CCACGTAGCG GAAGTATTTA CCGGTTCTCC TGGTAAGTAC
GTGCCTCTGA AAGACACTAT CCGTGGCTTC AAGGGCATTC TGGAAGGTGA GTTCGACCAC
GTTCCAGAGC AAGCGTTCTA CATGGTTGGC TCTGTCGACG AAGCCGTTGA GAAAGCCAAC
AAGAAGTAA
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| Protein sequence | MSTGTVVQVI GAVVDVEFPQ HAVPQVYDAL KITGEGTCNG LVLEVQQQLG GGVVRTIAMG
SSDGLRRGIE VENTGSAIAV PVGKATLGRI MNVLGEPVDE AGPIGEEDRY VIHRAAPSYE
EQSNTTELLE TGIKVIDLVC PFAKGGKVGL FGGAGVGKTV NMMELINNIA KAHSGLSVFA
GVGERTREGN DFYYEMMESG VLDKVAMVYG QMNEPPGNRL RVALTGLTMA EKFRDEGKDV
LLFVDNIYRY TLAGTEVSAL LGRMPSAVGY QPTLAEEMGV LQERITSTKT GSITSVQAVY
VPADDLTDPS PATTFAHLDA TVVLSRQIAS LGIYPAVDPL DSTSRQLDPL VVGQEHYDVA
NGVQNVLQRY KELKDIIAIL GMDELSDDDK MTVSRARKIE RFLSQPFHVA EVFTGSPGKY
VPLKDTIRGF KGILEGEFDH VPEQAFYMVG SVDEAVEKAN KK
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