Gene Sama_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3597 
Symbol 
ID4605844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4231044 
End bp4231457 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content52% 
IMG OID639783018 
Producthypothetical protein 
Protein accessionYP_929469 
Protein GI119776729 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC AGGTGGGTGA TACACAAATA CGGGAAAAAC ATCTTGCCAG CTGCCATTGT 
GGTGCCGTGG TGTTGGAGCT TTATTTACCC AATGGGATAG TGAATCCCCG CCGTTGCAAC
TGCTCCATGT GTCGTCGCCG GGGCGCCATT GCCGCCAGTG TGCCTTTGGC CGGTCTGAAA
ATTCTCAAAG GTCAGGACGC GCTGCGCCAA TACCAATTCA ACACCTGCAC GGCGAAGCAC
TTCTTTTGCG GCAACTGCGG CATTTACACT CATCACCAAC GTCGCTCCAA CCCAGCCGAG
TTTGGTTATA ACCTGGGATG TCTGGAAGGC GTTGACCCCT TTCTTTTGGG CGAAATTCCC
GTTTGTGATG GCGTCAATCA CCCCTCTGAT CATAAGGCGA CACCAACCAA CTAA
 
Protein sequence
MIKQVGDTQI REKHLASCHC GAVVLELYLP NGIVNPRRCN CSMCRRRGAI AASVPLAGLK 
ILKGQDALRQ YQFNTCTAKH FFCGNCGIYT HHQRRSNPAE FGYNLGCLEG VDPFLLGEIP
VCDGVNHPSD HKATPTN