| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3593 |
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| Symbol | |
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| ID | 4605840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4224835 |
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| End bp | 4225863 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639783014 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_929465 |
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| Protein GI | 119776725 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA CCACTCTCCC CACCCTGAAT ATCGCAATTC TGATACCCGA GACGCCGGTC
ATGAGCGGTG TGACGGCCTT TTTGGATCTG TTTCGTCATG CCAATACCTA TGCAGAACGC
ACCGGCCAAT CAGGTGTACC CCATGTGGAA CCCAGGGTGT ATTCGGCCCG GGGAGGCTGG
GTGAGCGCCG AAGGAATAGG GATAGAGTCC GTGCCCGTGT CTGCGTTGGA CCTGACGCAG
GTCGATGCCT TGGTTATCTC GGCGCCGCTT ATTCTGGATG GCCGCGATTT GCATCGCGAA
CTGGCCAGCT TCAAGGCCTT TGAAGATCAT ATCAAGGCAT TGGCAGACAA TGGCGTGCCC
GTTGCTGCTT GCTGCGCCGG CGCTTTCTTA TTGGCTGCCA CCGGACTCCT GGATGGTCGC
AAGGCCACAA CAGCCTGGTG GCTGGCGCCG TTGTTTGAAC AACACTTTCC CGAGGTTAGG
CTGTCGATGG TGTCTTTGGT CGAACGCGAT GGTCTGTTTT TTACTGCAGG GGCCTCCACA
GCAAGCTACA GCCTGGGACT GGCTTTGTTA GAGCAGCTGG TGGATGAGCA CTTTGCCCAG
GCCATGGCCA AAGTCTTTCT AATCGACCCC AACCGCAGCT CCCAGCGGGT GTTTATGGAT
CAGGTGCCGC TTCAGCCCCT GCATACCGAT CCCCAGGTGG CCGATATCAT GCGCTGGATA
AGCAATAACC TCACAGAAGA TTTGGCCCTG GAGTCGCTGG CCGAGCGTTT TGCCATGGGT
AAGCGCACCC TCATTCGCCG CTTCAAGGCA GCGCTGCACG ACACCCCGTC GAGCTACATA
CAGAAACTGC GCATAGACAG GGCGAAGCGC TTACTGGAGC GCACCGATTT ACCTCTGGAA
CGTATCCTGC CTGAGCTCGG GTATGAGGAT GTCAGCTCGT TTCGAAAGCT CTTTATCCAA
CATACCAGTC TCACGCCCAA GGCTTACCGG GAGAAGTTTC GCCCCGGCGA GCGTTGTTGC
GACCAATAG
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| Protein sequence | MTQTTLPTLN IAILIPETPV MSGVTAFLDL FRHANTYAER TGQSGVPHVE PRVYSARGGW
VSAEGIGIES VPVSALDLTQ VDALVISAPL ILDGRDLHRE LASFKAFEDH IKALADNGVP
VAACCAGAFL LAATGLLDGR KATTAWWLAP LFEQHFPEVR LSMVSLVERD GLFFTAGAST
ASYSLGLALL EQLVDEHFAQ AMAKVFLIDP NRSSQRVFMD QVPLQPLHTD PQVADIMRWI
SNNLTEDLAL ESLAERFAMG KRTLIRRFKA ALHDTPSSYI QKLRIDRAKR LLERTDLPLE
RILPELGYED VSSFRKLFIQ HTSLTPKAYR EKFRPGERCC DQ
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