Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3588 |
Symbol | |
ID | 4605835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4220816 |
End bp | 4221784 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639783009 |
Product | putative ABC-type multidrug transport system, ATPase component |
Protein accession | YP_929460 |
Protein GI | 119776720 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGG TGCTCGCGCC CCAAACCCTC ACCACGGCCC CCCTCGCCAT CGAGACCCGC GGTATGACCC GGCAATTTGG TGCCCTCAAA GCCGTGGATG GTGTGGATTT GGCGATTCCC CGCGGCAGCA TTTACGGATT TCTCGGCCCC AATGGCTGTG GCAAGTCCAC TTCCATCCGT ATGCTGACAG GACTGCTTAA GCCGACCAGT GGGGAGATCA GGGTGTTGGG CGAGCCCCTT AAGGGTGCAG AGGAAAAACT GCGCCGCCGC ATTGGCTACA TGACTCAGAA ATTCTCCCTC TACGAAAACC TGACCGTGTT GGAGAACCTG AGATTTGTGG CGCGCATCTA TGGACTGCAA GGTAATAAAG CCAAAGACAG GATAGAGCAG CTCTTGTCCC TCTACAGTCT CGAAGGCCGC GAAAGCCAGA TGGCGGGCTC CATGAGTGGT GGTCAGAAAC AGCGGCTCGC GCTGGCGGCA GCCACCATAC ACGAGCCAGA ACTGCTGTTT CTTGATGAGC CCACCTCAGC GGTGGACCCC GAAAACCGCC GCGAGTTTTG GGAACGTTTG TTTGATCTGT CGGCCAAGGG GTGCACTATT TTGGTGTCCA CCCACTACAT GGATGAGGCC GAGCGTTGCC ATGGGCTTGC CATTCTGGAA CGCGGTATCA AGCGCGCCGA CGGCTCGCCC AAAGCACTGA TGCAGGCCAT GGGGGCCAGG GTGGTGGAAA TCGGTGGCCA GGATTTGAGA GTGCTCAAGC AGCAATTGCT GGCTGAGGCG CCGGTATTGT CGGCGGCTCA GATTGGCAGT CGGCTGCGGG TGCTCATACG TAGCCAAATT GATGACCCCA TAGCCTGGCT TGGCCAGCGC GTCGGCACTA GAGAAATGGA CGAGGTCCGC CCCAGCCTTG AGGATGTGTT CGTGACCTGC ACCGGTCAGC GAGCCGAAGG AGGTGCCCAT GTGGCTTAG
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Protein sequence | MSEVLAPQTL TTAPLAIETR GMTRQFGALK AVDGVDLAIP RGSIYGFLGP NGCGKSTSIR MLTGLLKPTS GEIRVLGEPL KGAEEKLRRR IGYMTQKFSL YENLTVLENL RFVARIYGLQ GNKAKDRIEQ LLSLYSLEGR ESQMAGSMSG GQKQRLALAA ATIHEPELLF LDEPTSAVDP ENRREFWERL FDLSAKGCTI LVSTHYMDEA ERCHGLAILE RGIKRADGSP KALMQAMGAR VVEIGGQDLR VLKQQLLAEA PVLSAAQIGS RLRVLIRSQI DDPIAWLGQR VGTREMDEVR PSLEDVFVTC TGQRAEGGAH VA
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