| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3577 |
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| Symbol | |
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| ID | 4605824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4213271 |
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| End bp | 4214407 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782998 |
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| Product | transport protein, putative |
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| Protein accession | YP_929449 |
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| Protein GI | 119776709 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TACTGACAAT GCTGCGCAAA GAGTTTCTCG ATGCGCTCCG GGACAAGCGC
TCCGTGATGG CGGGCCTCTA TTACGCCATA GGCACGCCAC TTATCATGTC TGGTCTCTTT
ATGGTGCTGA TTAACCAGCT CTCCAGCCCG GATGATCTCT TCATCAAGAT TGAAAATGCC
GCCAAGGCCA AGGATCTGGT GCATTACCTC GAAAGCAAAG GCGTCAGCCA CAGCGATGAT
GCGACTCAAG CCAAACCCAT ACGCCTCGTC ATCGCCGAAG AATACCCGGC GCAGATGGCC
AAAGGAGAAG CGGCACTGGT GACCCTGGTG GCCGACAACT CAGATGAAAA ACTGCAGAAA
TCTATCCGCC GTCTGCAGGC ACTGCTGCAG CAATACAGCG CCGAAATGGG CAGCCTGCGG
CTCATTGCCC GCGGCATTGA CCCAAGGGTA GTGCAGCCCC TCAATGTAGA GCTGCAGGAT
GAGGCCACCG CCGACTCCAA GGGCGGTATG ATCCTGGGCC TGGCCATTTT CACCATGATT
TACTCGGTGT TTATCTCTGG CATGAACCTG GCCATCGACA CCAGCGCCGG TGAGCGCGAG
CGCAACAGCC TGGCATTGCT GCTGAGTCAT CCCATCAGCA CCCGCGAGCT GGTGTGGTCG
AAAATCCTGG CGGTTACCGG CTTTGCCATG CTGGGCGTCA TCCTGATATT GCTGGTGTCC
AAGTTTGCCT ATGCCATGGT GCCCTGGCAG GAACTGGGCT TTGCCATCAA TCTGGACCCC
AAATTTATGT TGGTGATGCT GCTGGTTGCC CTTCCGGTTG CCCTGCTGGC CGCCAGCCTC
GAGTTGGCCG TGTCCTTTAT GGCCAAAACG TTCAAAGAGG CACAGTCGTA TCTCACCATG
GTGCTGTTCG TGCCCCTGGC ACTGGCCATG ACCTCGACCT ACCAGATTGC GCCGGATGTA
TTGGCCTGGC TGCCTATTTC GGGTCAGCAG CAGGCACTGA TGGAACTGGT AAAGGGTAAA
GACTTGCCAA TGATGCAGTT ACTGGTGACT TCGGCCGGGA CCCTGGCCAT CGCGCTGGTA
CTGGCCTTCA CCATGGAAAG ATCGCTCAAG AGTGAAAAGG TGGTGTTTGG TCTGTAA
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| Protein sequence | MKRILTMLRK EFLDALRDKR SVMAGLYYAI GTPLIMSGLF MVLINQLSSP DDLFIKIENA
AKAKDLVHYL ESKGVSHSDD ATQAKPIRLV IAEEYPAQMA KGEAALVTLV ADNSDEKLQK
SIRRLQALLQ QYSAEMGSLR LIARGIDPRV VQPLNVELQD EATADSKGGM ILGLAIFTMI
YSVFISGMNL AIDTSAGERE RNSLALLLSH PISTRELVWS KILAVTGFAM LGVILILLVS
KFAYAMVPWQ ELGFAINLDP KFMLVMLLVA LPVALLAASL ELAVSFMAKT FKEAQSYLTM
VLFVPLALAM TSTYQIAPDV LAWLPISGQQ QALMELVKGK DLPMMQLLVT SAGTLAIALV
LAFTMERSLK SEKVVFGL
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