Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3576 |
Symbol | |
ID | 4605823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4212540 |
End bp | 4213274 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782997 |
Product | ATP-binding transport protein NatA |
Protein accession | YP_929448 |
Protein GI | 119776708 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG4555] ABC-type Na+ transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAG TGAATGGCTT ATACAAAAAA ATTGGCCAGG TGCAGGCGCT CAACAACCTC AGTTTTGAGG CCCGTGACGG CGAAATCACA GGACTGCTTG GCCCAAACGG TGCAGGGAAA ACCACCTGTT TGCGCACCCT GTTTGGTCTG CTGAAACCCG ATGAAGGTAA TGCCATTATC GATGGGGTGG ATGTGGCCGA GCAACCGATT GTTGCCAAGC AGGCGCTTGG TCTTTTTCCG GACCCTTTTG GCCTCTACGA GCGCTTAACT CCTCGGGAGT ACATACGTTT TTTCGCCGAA CTGTCAGGCA TGAATGGCCG CACTGCCGAT GAGGCTACCA GCCGGGTGCT GGCACAGCTC AATATGCAGG ACATTGCCGA CCGTCGCTGT AAAGGCTTCT CTCAGGGGCA AAGGATGAAA ACCGCTTTGG CGCAAGCCAT AGTGCATCAA CCACGCAACA TCATCCTCGA TGAGCCCACC CGAGGCCTGG ATGTGATGAG CACCCGGGTG CTGAGGGGCA TGCTGAGTGA TTTGCGCGCC CAGGGCCACT GCGTCCTCTT CTCAAGCCAT GTAATGCAGG AAGTCGCCGC ACTTTGCGAC CGGGTGATAG TGATGGCCCG TGGCGAAGTG GTTGCCGTGG GCAGCCCCGC CGAGCTGTGT GAGCAAACCG GACACGCTTC TCTGGAAGAA GCCTTTATTC AACTGATTGG AACCGACGAA GGAATAGCCG CATGA
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Protein sequence | MIKVNGLYKK IGQVQALNNL SFEARDGEIT GLLGPNGAGK TTCLRTLFGL LKPDEGNAII DGVDVAEQPI VAKQALGLFP DPFGLYERLT PREYIRFFAE LSGMNGRTAD EATSRVLAQL NMQDIADRRC KGFSQGQRMK TALAQAIVHQ PRNIILDEPT RGLDVMSTRV LRGMLSDLRA QGHCVLFSSH VMQEVAALCD RVIVMARGEV VAVGSPAELC EQTGHASLEE AFIQLIGTDE GIAA
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