Gene Sama_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3576 
Symbol 
ID4605823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4212540 
End bp4213274 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID639782997 
ProductATP-binding transport protein NatA 
Protein accessionYP_929448 
Protein GI119776708 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TGAATGGCTT ATACAAAAAA ATTGGCCAGG TGCAGGCGCT CAACAACCTC 
AGTTTTGAGG CCCGTGACGG CGAAATCACA GGACTGCTTG GCCCAAACGG TGCAGGGAAA
ACCACCTGTT TGCGCACCCT GTTTGGTCTG CTGAAACCCG ATGAAGGTAA TGCCATTATC
GATGGGGTGG ATGTGGCCGA GCAACCGATT GTTGCCAAGC AGGCGCTTGG TCTTTTTCCG
GACCCTTTTG GCCTCTACGA GCGCTTAACT CCTCGGGAGT ACATACGTTT TTTCGCCGAA
CTGTCAGGCA TGAATGGCCG CACTGCCGAT GAGGCTACCA GCCGGGTGCT GGCACAGCTC
AATATGCAGG ACATTGCCGA CCGTCGCTGT AAAGGCTTCT CTCAGGGGCA AAGGATGAAA
ACCGCTTTGG CGCAAGCCAT AGTGCATCAA CCACGCAACA TCATCCTCGA TGAGCCCACC
CGAGGCCTGG ATGTGATGAG CACCCGGGTG CTGAGGGGCA TGCTGAGTGA TTTGCGCGCC
CAGGGCCACT GCGTCCTCTT CTCAAGCCAT GTAATGCAGG AAGTCGCCGC ACTTTGCGAC
CGGGTGATAG TGATGGCCCG TGGCGAAGTG GTTGCCGTGG GCAGCCCCGC CGAGCTGTGT
GAGCAAACCG GACACGCTTC TCTGGAAGAA GCCTTTATTC AACTGATTGG AACCGACGAA
GGAATAGCCG CATGA
 
Protein sequence
MIKVNGLYKK IGQVQALNNL SFEARDGEIT GLLGPNGAGK TTCLRTLFGL LKPDEGNAII 
DGVDVAEQPI VAKQALGLFP DPFGLYERLT PREYIRFFAE LSGMNGRTAD EATSRVLAQL
NMQDIADRRC KGFSQGQRMK TALAQAIVHQ PRNIILDEPT RGLDVMSTRV LRGMLSDLRA
QGHCVLFSSH VMQEVAALCD RVIVMARGEV VAVGSPAELC EQTGHASLEE AFIQLIGTDE
GIAA