Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3574 |
Symbol | |
ID | 4605821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4210552 |
End bp | 4210923 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782995 |
Product | GntR family transcriptional regulator |
Protein accession | YP_929446 |
Protein GI | 119776706 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAAC TTCTCAATGT CAACCCCTCA AGTGGTGAGC CGATTTACCG GCAGCTGCAC GAGCAGATAG TCAGACTTAT TGTCTCTGGG CAGTTATCCC CGGAGACAGT GCTGCCGTCT GTGCGCCAGA TGGCGGAATA TCTGGCGGTC AATCCCATGA CGGTATCGCG CGCCATTCAG CAGTTGGTGG ATCAGGGCTA TCTGGAACGC CGCCGCGGTC AGGCTACCCG GGTGGCTGAG AGCAGCGGCA ACCACGCCAC CTCGGGGGCG CAGCTGCTGA CGCCTGAGCT GGAAAAGCTC TGTCAGCAGG CGCGGCAACT GGGCGTAGAC CTTGATGAAC TTAAATCTCT GCTCGACAGC ATCTGGCAAT GA
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Protein sequence | MLELLNVNPS SGEPIYRQLH EQIVRLIVSG QLSPETVLPS VRQMAEYLAV NPMTVSRAIQ QLVDQGYLER RRGQATRVAE SSGNHATSGA QLLTPELEKL CQQARQLGVD LDELKSLLDS IWQ
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