Gene Sama_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3574 
Symbol 
ID4605821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4210552 
End bp4210923 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID639782995 
ProductGntR family transcriptional regulator 
Protein accessionYP_929446 
Protein GI119776706 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAC TTCTCAATGT CAACCCCTCA AGTGGTGAGC CGATTTACCG GCAGCTGCAC 
GAGCAGATAG TCAGACTTAT TGTCTCTGGG CAGTTATCCC CGGAGACAGT GCTGCCGTCT
GTGCGCCAGA TGGCGGAATA TCTGGCGGTC AATCCCATGA CGGTATCGCG CGCCATTCAG
CAGTTGGTGG ATCAGGGCTA TCTGGAACGC CGCCGCGGTC AGGCTACCCG GGTGGCTGAG
AGCAGCGGCA ACCACGCCAC CTCGGGGGCG CAGCTGCTGA CGCCTGAGCT GGAAAAGCTC
TGTCAGCAGG CGCGGCAACT GGGCGTAGAC CTTGATGAAC TTAAATCTCT GCTCGACAGC
ATCTGGCAAT GA
 
Protein sequence
MLELLNVNPS SGEPIYRQLH EQIVRLIVSG QLSPETVLPS VRQMAEYLAV NPMTVSRAIQ 
QLVDQGYLER RRGQATRVAE SSGNHATSGA QLLTPELEKL CQQARQLGVD LDELKSLLDS
IWQ