Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3570 |
Symbol | |
ID | 4605817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4205962 |
End bp | 4206360 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782991 |
Product | thioesterase superfamily protein |
Protein accession | YP_929442 |
Protein GI | 119776702 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGT TTGACCTCAG TATTCAGCCC AGATTCAACG AAACCGATGG ATTGGGCCAT ATCAATAACA CGGTGATCCC CGTCTGGTTC GAAGCTGCCC GCGAGCCGAT TTTTGCCATC TTCAACCCCG AGTTGGACCT GAACCACTGG AACCTGATTG TGGCCGGGTT TACCATCGCT TTTACCGCGC CCACCTATTA CGGCAAGCCG GTTGAGGTGA TTACCCGCAT CTCCCGCATC GGTAATTCCA GTTTTGAAGT GCTGCAGCAG AGTTTTCAGG CCGGCAAAAT GACCGCCGAA GCCAAAACCA CCCTGGTGCA TTACGATTAC CAGACCGAAA AAAGCGTGGG TATTCCCGCC GATATCCGCG AGCAGCTTGG CACCTTCCTC GTTGTCTGA
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Protein sequence | MAQFDLSIQP RFNETDGLGH INNTVIPVWF EAAREPIFAI FNPELDLNHW NLIVAGFTIA FTAPTYYGKP VEVITRISRI GNSSFEVLQQ SFQAGKMTAE AKTTLVHYDY QTEKSVGIPA DIREQLGTFL VV
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