Gene Sama_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3570 
Symbol 
ID4605817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4205962 
End bp4206360 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content54% 
IMG OID639782991 
Productthioesterase superfamily protein 
Protein accessionYP_929442 
Protein GI119776702 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGT TTGACCTCAG TATTCAGCCC AGATTCAACG AAACCGATGG ATTGGGCCAT 
ATCAATAACA CGGTGATCCC CGTCTGGTTC GAAGCTGCCC GCGAGCCGAT TTTTGCCATC
TTCAACCCCG AGTTGGACCT GAACCACTGG AACCTGATTG TGGCCGGGTT TACCATCGCT
TTTACCGCGC CCACCTATTA CGGCAAGCCG GTTGAGGTGA TTACCCGCAT CTCCCGCATC
GGTAATTCCA GTTTTGAAGT GCTGCAGCAG AGTTTTCAGG CCGGCAAAAT GACCGCCGAA
GCCAAAACCA CCCTGGTGCA TTACGATTAC CAGACCGAAA AAAGCGTGGG TATTCCCGCC
GATATCCGCG AGCAGCTTGG CACCTTCCTC GTTGTCTGA
 
Protein sequence
MAQFDLSIQP RFNETDGLGH INNTVIPVWF EAAREPIFAI FNPELDLNHW NLIVAGFTIA 
FTAPTYYGKP VEVITRISRI GNSSFEVLQQ SFQAGKMTAE AKTTLVHYDY QTEKSVGIPA
DIREQLGTFL VV