| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3546 |
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| Symbol | |
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| ID | 4605793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4177877 |
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| End bp | 4179913 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782967 |
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| Product | oligopeptidase A |
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| Protein accession | YP_929418 |
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| Protein GI | 119776678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC CACTGCTTGC GGCCAACGCG CTGCCCCCCT TTTCGGCCAT CAAGCCAGAG
CATATTCAGC CAGCGGTCGA GCAGGCCATA GACCACTGCC GGGCAGAAAT TGCACGGGTA
CTGGAACGTG GTGATTTCAG CTGGCAGGGA CTGGTTGCGC CCCTGGAGGA AGCTGACGAT
CGCCTCAGCA AACTTTGGTC ACCGGTATCG CACATGAACT CAGTGCTCAG CACAGAAGCA
TGGCGCGCGG CCCACGACGC TTGCCTGCCG CTTCTGTCTG AGTATGGCAC CTTTGTGGGC
CAGCATCAGG GGCTGTATCA GGCCTATAAA ACCCTTAAAA ATTCTGATGA ATTTCAAGGT
CTGTCCAAGG CGCAGCAACA GGTGATTGAC CATGCCCTGC GAGACTTTGA ACTCTCGGGT
ATTGGCTTGG ATGACGACAA AAAGGCCCGT TATGGCGAAA TAGTCAAACG CCTGTCGGAA
CTGTCGAGCA GCTTCTCCAA TCAGGTGTTG GATGCCACCC ACGCCTGGCA GAAGCTCATC
ACCGATGAGT CCGAACTTAA GGGTCTGCCT GAATCGGCCC TTGCTGCAGC ACGCGCCATG
GCAGAAGAAA AAGGCGAGCA GGGGTATCTG TTCACCCTCG ACTTCCCATC GTATTTGCCT
GTGATGATGT ACAGCGAAAA CCGTGAACTG CGCCAGGAGT GCTACACCGC CTTCGTGACC
CGCGCCTCGG ATCAGGGCCC CAACGCCGGT GAATTTGACA ATGGCCCCTT GATGGAAGAG
TTGCTGGCGC TGCGCCACGA GCTGGCCACC CTGCTCGGTT TCGACAGCTT TGCCCACAAG
TCGCTGGCCA CCAAGATGGC CGAAACACCG GGCCAGGTTA TCAGCTTCCT GAATGAGCTG
GCCCTGCACT CTCGTCCACA GGCCAAACAG GAGCTGGATG AGCTCAAGGC CTTCGCCGCG
AAAGAATATG GCCAAACCGA CCTCAAGGCA TGGGATTTAA GCTTTTACGC CGAAAAACTC
AAACAGCACA GATACGAAAT TTCCCAGGAA GAACTGCGCC CTTACTTTCC CGAAAACAAG
GTACTGAGCG GCCTCTTCCA CACGGTAGAG CGTCTCTTTG GCATGAAGAT AGTCGAGCAG
CAGGAATTTG ACCGCTGGCA TAAGGACGTG CGCTTCTTCC ACATTATGGA CAGCGAAGGC
GAGCACAGAG GCAGCTTCTA TCTGGATCTC TACGCCCGCA GCGGTAAACG CGGCGGCGCC
TGGATGGACG AGTGCCGGGT TCGTCGTCAA ACCCCCGATG GGCTGCAAAA ACCCGTGGCT
TACCTCACCT GTAACTTCAA TGGTCCCGTG GGCAATAAAC CAGCGCTCTT TACCCATGAC
GAAGTGGTTA CCCTGTTCCA TGAGTTTGGC CATGGCATCC ACCATATGCT GACCAAGGTA
GAGGTAGGCG GTGTATCCGG TATCAATGGT GTGCCCTGGG ATGCCGTGGA GCTGCCAAGC
CAGTTCCTCG AGAATTGGTG CTGGGAAGAA GCAGCCCTCG GCGAAATCTC CGGCCACTAC
GAAACCGGCG AGCCGCTGCC CAAGGCCATG CTGGACAAGA TGTTGGCGGC CAAAAATTTC
CAATCCGCCA TGATGATGGT GCGCCAGCTG GAGTTTTCGC TGTTCGATTT CCGCCTGCAC
CTGGAATACA ACGGCGAAGA CGGTGCCCGC ATTCAGGAAA CTCTGGACGA AGTGCGTCAG
CAGGTGGCCG TGGTGATCCC CCCCAGCTTT AATCGCTTCC AGCACAGCTT CTCCCATATT
TTTGCCGGGG GATATGCCGC AGGTTACTAC AGCTACAAGT GGGCCGAAGT ACTGTCGGCC
GATGCCTTCT CGCGGTTTGA AGCTGAAGGT ATCTTTAATC CAGATACGGG GCGCGACTTC
CTTACCCATA TCCTTGAGAT GGGTGGCAGC GAAGAGCCCA TGGAACTGTT CCGCCGCTTC
ATGGGCCGGG AGCCCAATAC AGATGCGCTA CTGCGCCACA GCGGCATTCA GCACTGA
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| Protein sequence | MTNPLLAANA LPPFSAIKPE HIQPAVEQAI DHCRAEIARV LERGDFSWQG LVAPLEEADD
RLSKLWSPVS HMNSVLSTEA WRAAHDACLP LLSEYGTFVG QHQGLYQAYK TLKNSDEFQG
LSKAQQQVID HALRDFELSG IGLDDDKKAR YGEIVKRLSE LSSSFSNQVL DATHAWQKLI
TDESELKGLP ESALAAARAM AEEKGEQGYL FTLDFPSYLP VMMYSENREL RQECYTAFVT
RASDQGPNAG EFDNGPLMEE LLALRHELAT LLGFDSFAHK SLATKMAETP GQVISFLNEL
ALHSRPQAKQ ELDELKAFAA KEYGQTDLKA WDLSFYAEKL KQHRYEISQE ELRPYFPENK
VLSGLFHTVE RLFGMKIVEQ QEFDRWHKDV RFFHIMDSEG EHRGSFYLDL YARSGKRGGA
WMDECRVRRQ TPDGLQKPVA YLTCNFNGPV GNKPALFTHD EVVTLFHEFG HGIHHMLTKV
EVGGVSGING VPWDAVELPS QFLENWCWEE AALGEISGHY ETGEPLPKAM LDKMLAAKNF
QSAMMMVRQL EFSLFDFRLH LEYNGEDGAR IQETLDEVRQ QVAVVIPPSF NRFQHSFSHI
FAGGYAAGYY SYKWAEVLSA DAFSRFEAEG IFNPDTGRDF LTHILEMGGS EEPMELFRRF
MGREPNTDAL LRHSGIQH
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