Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3541 |
Symbol | |
ID | 4605788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4173236 |
End bp | 4174129 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639782962 |
Product | pirin-like protein |
Protein accession | YP_929413 |
Protein GI | 119776673 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAG AAGCAACGCA GCCAGTCACA GAGCGACTGC TCCCCAGAAC CAGCGACGTT GGTGGCATAC CTGTGGCCAG GGCCATTCCC CAAAAGGCCA GACGCCTGAT CGGTCCCTGG TGTTTTTTGG ACCATCTCGG CCCAATTTCA GGCCCGGCAA CCGTGAATGT GGGTGAGCAC CCGCACACGG CACTGCAAAC CTTCACCTGG ATGATGGCAG GTGAGATATT GCACCGCGAC AGCCTCGGCA GTGCTCAGGT GATACGACCC GGCCAGGTGA ATCTGATGAC GGCAGGCCAT GGTATCGCCC ACACCGAAGA GTCTTTGCCA AATCAGACCC ATCTGCACGC CGCTCAGTTT TGGATAGCGC TGCCTGCTGC CCACAAGGAC ACAGCACCCA GGTTCGATCA TTATCCCACA CTGCCCCGTT GGCAGGATGC CGGGGCAAAT TTCACCCTGC TGGTAGGTGA CTGGGGCAAT CATCGCTCGC CGGTGCTGCA CTTCTCACCC ATATTGGGGC TGGAGATTTT CCACAGTGCC GACACAGGGG CGCCTGTGAC CCTGACGTTG CCCCTCGAGC CAACATTCGA GTACGGGCTC ATGCCACTGG AGGGCAGCTT CCAGTTGGCA GGCGAGAGCT TCAGCGATAA CCAGCTGGCG TTTGTGAACA GGGGCGAGAC ATCAGTGACC ATCCGCTTGC AGGCAGGATG CCGCCTGCTG CTTATCGGTG GTGAGCCCTT AACCGATGAC ATCACTATCT GGTGGAACTT TGTTGGTCAC AGCAAAGCCG ACATCGCAGA GGCCCAAGCA CAGTGGCTTG CACAGGATCC CCGCTTCGGA CCTGTCACCG GTTATCAGGG GCAACGCCTG GAGCCGCCAC CCATCCCCTG GTGA
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Protein sequence | METEATQPVT ERLLPRTSDV GGIPVARAIP QKARRLIGPW CFLDHLGPIS GPATVNVGEH PHTALQTFTW MMAGEILHRD SLGSAQVIRP GQVNLMTAGH GIAHTEESLP NQTHLHAAQF WIALPAAHKD TAPRFDHYPT LPRWQDAGAN FTLLVGDWGN HRSPVLHFSP ILGLEIFHSA DTGAPVTLTL PLEPTFEYGL MPLEGSFQLA GESFSDNQLA FVNRGETSVT IRLQAGCRLL LIGGEPLTDD ITIWWNFVGH SKADIAEAQA QWLAQDPRFG PVTGYQGQRL EPPPIPW
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