| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3534 |
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| Symbol | |
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| ID | 4605781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4165671 |
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| End bp | 4166348 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782955 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_929406 |
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| Protein GI | 119776666 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.868885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAATCC TTTTGGTTGA AGACGACAAC ACCACTTCAG AATACATAGT CAAAGGTTTT
TCCGAACAGG GACACAATAT TGAAGCGGCC GCCGATGGTC ACCAGGGCCT GTTGCTGGCC
ACCAGCAACC AGTATGACCT GATTATTCTC GACCGCATGC TACCCGGTCT CGATGGGCTG
GCACTGCTGG CGGCGCTGCG TGCCAACGCC AATCAAACCC CGGTGCTTAT CCTTTCAGCC
TTGTCCAACG TGGACGAGCG GGTAAAGGGC CTGCGCAGCG GCGGCGACGA TTATATGACC
AAGCCTTTCG CCTTCTCAGA GCTTCTGGTG CGCGCCGAAA TTCTGGTGTC CCGGGGGCAA
ACCGCGCCGG TGCAGACACA CCTGCAAGCG GGCCCACTGG AAATGGAGCT GCTCACCCGC
AACGTGACTC TCGATGGCCA CGAGCTGATG CTGCAACCCA AAGAGTTTCA ACTGCTCAAG
TACCTGATGG AACACCCTAA TCAGGTCATA AGCCGTACCC TGTTGTTCGA GGCTGTGTGG
GATTATCACT TCGATCCGCG CACCAATGTG ATCGACGTAC ATATCGCCAA ACTCAGACGC
AAGTTTGAAG AGCTGGGCTA CGGCGAGCTG ATAGAAACAG TCCGGGGAGC GGGTTATCGT
CTTCGCCAAA GGCATTAA
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| Protein sequence | MKILLVEDDN TTSEYIVKGF SEQGHNIEAA ADGHQGLLLA TSNQYDLIIL DRMLPGLDGL
ALLAALRANA NQTPVLILSA LSNVDERVKG LRSGGDDYMT KPFAFSELLV RAEILVSRGQ
TAPVQTHLQA GPLEMELLTR NVTLDGHELM LQPKEFQLLK YLMEHPNQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGYGEL IETVRGAGYR LRQRH
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