Gene Sama_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3525 
Symbol 
ID4605772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4160346 
End bp4160882 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID639782946 
Productmolybdenum cofactor biosynthesis protein B 
Protein accessionYP_929397 
Protein GI119776657 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0521] Molybdopterin biosynthesis enzymes 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR02667] molybdenum cofactor biosynthesis protein B, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.960737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACACT GCCGCGAAAC CGAATTCAAA CCCCTGAATA TTGCTGTGCT GACACTGTCA 
GACACCCGGG ATGAGTCCAA CGATACTTCG GGCGCCTTCC TTGCCGATGC CGTTACCGAA
GTGGGACACA AGCTCGTTGC CCGGCGCATT ATCAAGGATG ACAAATATCT CATCCGCGCC
CAAATCTCCG CCTGGATAGC CGACCCTGAG GTGCAGGTCA TTATCAGCAC CGGCGGTACT
GGCTTTTCGG GTCGCGACAA CACACCGGAT GCCGTGATGC CACTCTTTGA CAAGGCCATT
GAAGGGTTCG GCGAGCTGTT CCGTTACCTG AGTTTCCAGG AGCTCGGCAC CTCCACGGTG
CAATCCCGCG CCTTGGGCGG CGTCGCCAAC GGTACCGCCA TTTTTTGCCT GCCCGGCTCC
ACCGGTGCCT GTCGCACCGC CTGGCGTGGC ATACTCAGCG AACAACTGGA TGCCCGCCAT
CGCCCCTGTA ATTTTGTTGC CCATCTTAAA TCCGCCAAGG AGTTGCCATC ATCATGA
 
Protein sequence
MGHCRETEFK PLNIAVLTLS DTRDESNDTS GAFLADAVTE VGHKLVARRI IKDDKYLIRA 
QISAWIADPE VQVIISTGGT GFSGRDNTPD AVMPLFDKAI EGFGELFRYL SFQELGTSTV
QSRALGGVAN GTAIFCLPGS TGACRTAWRG ILSEQLDARH RPCNFVAHLK SAKELPSS