| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3504 |
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| Symbol | |
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| ID | 4605751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4137615 |
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| End bp | 4138367 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782925 |
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| Product | competence protein ComF |
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| Protein accession | YP_929376 |
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| Protein GI | 119776636 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG TATCCGTGTG GCGCCGAGCA TGGACGTATG TCGTTACCAC CTTGGCGCAG
AGTTTACCCA ACCGCTGCCT GCTGTGCCAC CAAACGGTAA TCGAAGGCTC TGGGGTCTGC
AGCCTTTGTC TGCAACGCTG TCTGTATCAC GGCCCCGTAT GTCTGGGTTG TGGTCGCAGC
CTGGTCAATG ACGGTGCCTT TTGTGGTGCC TGTCGGGTGT TGGGCGCGCT GCCTGTTATC
GCGCCCTGCA GCTACCACCA AGGCCTGGGA GCCAGTATTG CCGCCATTAA ATATCAGGGG
CAATTTGCAG CGCTGGATGT TCTTTGCCGA GCACTGATGG CCAGAGTGAC TCAACTGACA
GAGGAGGGCG AAATCCCCCC TGTCTCTTTA CTCCTGCCGG TTCCCCTTCA CCCCAAACGT
CTCAAAACCC GCGGCTTTAA TCAGGCCTAT GAAATAGCGC TCTTGCTGTC AAAGCTCAGT
GGTATCCCTC TGTGCGATGA CCTGTTACGG CGGCGACGTG ATACCCAGCC TCAGGCTGGC
CTTACCGGTA AAGCGAGGCG TAAAAACCTA TTGGGCGCCT TTGAGCTCAC GGGGAGCTGT
CATCAGGGCT CAGTGGCCTT GGTGGACGAT GTAGTCACCA CCGGCAGTAC GGCCAATGAA
ATAGCCACCA TGTTACAGCT TCAGGGTGTC AGGGTGCAGG TATGGTGTCT TGCCCGGGCG
GAAGCCCCCG GGCTGCTGGA CACGTTCAGT TAG
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| Protein sequence | MDEVSVWRRA WTYVVTTLAQ SLPNRCLLCH QTVIEGSGVC SLCLQRCLYH GPVCLGCGRS
LVNDGAFCGA CRVLGALPVI APCSYHQGLG ASIAAIKYQG QFAALDVLCR ALMARVTQLT
EEGEIPPVSL LLPVPLHPKR LKTRGFNQAY EIALLLSKLS GIPLCDDLLR RRRDTQPQAG
LTGKARRKNL LGAFELTGSC HQGSVALVDD VVTTGSTANE IATMLQLQGV RVQVWCLARA
EAPGLLDTFS
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