| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3475 |
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| Symbol | |
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| ID | 4605722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4104067 |
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| End bp | 4107213 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782895 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_929347 |
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| Protein GI | 119776607 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATT ACATTATCAA GTCTTCTATC CGCCAGCGAT TTATGGTGCT GGTGGTGGCG
CTGATGGTGA CCCTTTGGGG CATTACAGAA CTTAAACGCA CACCGCTGGA TGCACTGCCG
GACTTATCTG ACGTGCAGGT GATCATCAAA ACCAGCTTCC CCGGGCAAGC GCCACAGCTG
GTGGAAGAGC AGGTTACCTA TCCCCTGTCC ACTGCCATGC TGGCTGTGCC GGGGGCCAAG
ACCGTACGGG GCTTCTCCAT GTTTGGAGAC TCCTACGTTT ATGTGATTTT TGAAGACGGC
ACCGATATTT ACTGGGCCCG CTCGCGGGTG CTGGAATACT TAAGCCAGGT ACGCACCCGG
CTGCCAGCCG GGGTTGAGCC GTCCCTCGGC CCCGACGCTT CCGGTGTAGG CTGGGTATAT
GAATACGCCC TTGTCGACCG AAGTGGCAAC CTGGACCTGT CACAACTCAA GAGCTTGCAG
GACTGGTACC TGAAGCTGGA ACTGCAAAGT GTTGAAGGTG TGTCTGAAGT GGCAACCGTC
GGCGGCATGG AGCAGACTTA CCAAATCGTG CTGGAGCCCG ACAAGCTGGC TATCTATAAG
CTCGACATCG CCACCATCAA GGCCGCCATC ACCCGCGCCA ACAGCGAGGC CGGTGGCAGT
GTGGTGGAAA TGGCCGAAGC CGAGTACATG GTGCGAGCCA AAGGCTACCG CCAAACGCTG
GATGACTTCA GGGAAATCCC CCTTGGGATC ACCACAGGTG CCGGCACGCC GCTGTTGCTT
AAAGATGTGG CCACCATTCG CAAGGGCCCG GCATCCCGCC GTGGCATCGC CGAACTCGAC
GGCGAAGGCG AGGTGGTGGG GGGTATTATC GTGATGCGTT ACGGTGAAAA TGCCCTGGCC
ACCATAGATG CGGTCAAAGC CAAGCTGGAC GAACTCAAGG CAGGTTTACC TGATGGCGTC
GAGATTGTGC CTACCTACGA TCGTTCGCAG CTCATCCAAA ACTCGGTGGA CAACCTGCTC
ACCAAGGTGG TCGAAGAGAT GCTGGTAGTG GGCTTGGTGT GCCTGCTGTT TTTGCTGCAC
GCCCGCTCGA CCCTGGTGGC CGTGTTTACC CTGCCATTGT CGATTCTTAT CGCTTTTATT
GTGATGAATC ACATGGGCAT CAATGCCAAC ATCATGAGTC TTGGTGGTAT TGCTATCGCC
ATTGGTGCCG TGGTGGACGG CGCCATTGTG ATGATTGAAA ACCTGCACAA GCACCTGGAG
CACTTCAAAC GGCAACATGA ACGCGAGCCA AGCACCCGCG AGCACTGGGA AGTCGTGACC
CAGGCATCGC TGGAAGTGGG GCCCGCGCTG TTTTTCTCGC TGCTGATTAT TACCCTGAGC
TTTATTCCTG TGTTTGCGCT GGAAGCTCAG GAAGGCCGTC TGTTTGCCCC CCTCGCCTAC
ACCAAAACCT TTGCCATGGC CGCAGCCTCA GTGCTGGCCA TTACTTTGGT GCCGGTGCTC
ATGGGCTATT TTATCCGCGG TAAAATCCCG TCGGAGGAAG CCAACCCCAT CAGTCGCTTT
TTGATTGCTC TGTATAAACC CGCGCTGAAC AAAGTATTGG CCTTCCCCAA GTTGACCTTG
TTGGTTGCGC TCCTGGCACT GGCCAGTGTG GTGTATCCGG CAAGCCGAAT GGGCAGTGAA
TTTATGCCCG AACTGGAAGA AGGGGATTTG TTGTACATGC CCACGGCCCT GCCGGGGATA
AGCGCGGGCA AGGCCGCCGA AATACTGCAG CAAACTGACA GGCTGATAAA AACCGTGCCT
GAAGTGGCCA GAGTGTTCGG CAAAATTGGC CGCGCCGAAA CCGCCACGGA TCCGGCGCCA
CTGACCATGC TGGAAACCAC CATCATGCTC AAGCCTCGGC AGGAATGGCG TGAAGGCATC
AATCTGAACG ATATCGTGGA TGAACTGCAG CGTACCGTGA AGGTACCAGG GCTCACCAAT
GCCTGGGTGC AACCCATCAA AACCCGCATC GACATGCTCT CTACCGGCAT AAAAACGCCG
GTGGGCATCA AGATAACCGG GGCCAATGTG GACGAGTTGC AGCAAATTGG TGCCAACGTC
GAGGCCATTC TGGCCGCATT GCCCAACACC CGTTCCGCTT ACGCAGAACG GGCCGGTGGA
GGACGCTATA TCGACATCGC ACCCAAGCTG GATGTAGCCT CCCGCTACGG CATGACCCTC
AACGACATCC AGGACGTGGT GCGCTACGCC ATTGGTGGCA TGAATGTAGG TGAGTCAGTG
CAGGGCGCCG AACGCTATCC CATCAACCTG CGTTACCCAC GGGAACTGCG CGACAGCCTG
GAAAAACTGC GGGCATTGCC GGTTATCACC AAATCAGGGC ACTATCTGCC TTTGGGCAAT
CTCGCTGACA TCCAAATCAG CGATGGCCCT CCGATGCTCA AGAGCGAAAA CGGTCGGCTG
ATCTCCTGGG TGTTTGTGGA CATTCAGGGC ACATCAATCG GTGAATACAT ACAGACAGCC
AAATCGGCAC TGGAAGCTGA GCTGAACCTG CCCCCCAGAT ACAGCTACAG CTTTGCCGGC
CAGTATGAAT ATATGCAGCG AGTCGATGCC AAGTTAAAGC AGGTGGTCCC CCTCGCCATC
GGCATCATCT TTATCCTGCT GATGCTGACC TTTGGCTCGG GCAAGCAAGC GAGCATGATC
ATGCTCAGTC TGCCTTTTGC GCTGGTTGGC AGCACCTGGT TGCTATATTT GCTGGACTAC
AACCTGTCGG TCGCAGTGGC CGTGGGTATG ATTGCCCTCG CGGGGGTTGC CGCCGAGTTT
GGTGTGGTGA TGCTGGTGTA TCTGAACAAC GCCATCAAAG ACCGCGATGC GCTGGGCCAC
TACCACAACG AAAGCGATCT CAAGGCCGCA TTGGTTGAAG GTGCAGTCAT GCGTATTCGT
CCCAAAGCCA TGACGGTAGC GACCATCTTT TTTGGTCTCC TGCCCATCAT GTGGGGCGCG
GGGTCAGGCA ATGAGGTGAT GCAGAAGATT GCTGCACCTA TGGTTGGCGG CATGGTGACG
GCACCATTGC TGTCGCTGTT TGTGCTACCG GCGCTCTATT TGCTGGTATA CCGCAAACGC
TTCGCCGCCA AGGGTGACGA ACAGTAA
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| Protein sequence | MLDYIIKSSI RQRFMVLVVA LMVTLWGITE LKRTPLDALP DLSDVQVIIK TSFPGQAPQL
VEEQVTYPLS TAMLAVPGAK TVRGFSMFGD SYVYVIFEDG TDIYWARSRV LEYLSQVRTR
LPAGVEPSLG PDASGVGWVY EYALVDRSGN LDLSQLKSLQ DWYLKLELQS VEGVSEVATV
GGMEQTYQIV LEPDKLAIYK LDIATIKAAI TRANSEAGGS VVEMAEAEYM VRAKGYRQTL
DDFREIPLGI TTGAGTPLLL KDVATIRKGP ASRRGIAELD GEGEVVGGII VMRYGENALA
TIDAVKAKLD ELKAGLPDGV EIVPTYDRSQ LIQNSVDNLL TKVVEEMLVV GLVCLLFLLH
ARSTLVAVFT LPLSILIAFI VMNHMGINAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
HFKRQHEREP STREHWEVVT QASLEVGPAL FFSLLIITLS FIPVFALEAQ EGRLFAPLAY
TKTFAMAAAS VLAITLVPVL MGYFIRGKIP SEEANPISRF LIALYKPALN KVLAFPKLTL
LVALLALASV VYPASRMGSE FMPELEEGDL LYMPTALPGI SAGKAAEILQ QTDRLIKTVP
EVARVFGKIG RAETATDPAP LTMLETTIML KPRQEWREGI NLNDIVDELQ RTVKVPGLTN
AWVQPIKTRI DMLSTGIKTP VGIKITGANV DELQQIGANV EAILAALPNT RSAYAERAGG
GRYIDIAPKL DVASRYGMTL NDIQDVVRYA IGGMNVGESV QGAERYPINL RYPRELRDSL
EKLRALPVIT KSGHYLPLGN LADIQISDGP PMLKSENGRL ISWVFVDIQG TSIGEYIQTA
KSALEAELNL PPRYSYSFAG QYEYMQRVDA KLKQVVPLAI GIIFILLMLT FGSGKQASMI
MLSLPFALVG STWLLYLLDY NLSVAVAVGM IALAGVAAEF GVVMLVYLNN AIKDRDALGH
YHNESDLKAA LVEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNEVMQKI AAPMVGGMVT
APLLSLFVLP ALYLLVYRKR FAAKGDEQ
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