| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3449 |
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| Symbol | |
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| ID | 4605696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4079887 |
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| End bp | 4080867 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782869 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_929321 |
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| Protein GI | 119776581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGG ACAAGCTGAC ACGCATCGAT CTGAATTTGT TGGTGGTACT GCAGGTACTG
CTGGAAGAAC AAAGTGTCAC CCGCGCTGCT GTGCGCCTGA ATCTCAGCCA GTCAGCCCTG
TCCAAGAGCC TGAGCCGACT GAGGGAAACC CTGGGCGATC CGCTGTTTTC CCGTACGGCC
CACGGGCTGA AACCCACGGC CCACGCACTG GCATTGGCCG AGCGACTGCC TGGAGTATTG
CAGGCGCTGA ATCAGCTGGT GATGCCACCC AGTTTTGATC CCGCCAGCAG TACCCGCACC
TTCAGTTTTG CCATGGTAGA AAGCGCGTAC GAGACGTTGA TCCCCGGCTT TATCGGCCCC
CTCTTGTCCA TGGCGCCGGG TCTGCGACTC AATTCCTACG TGTGGAACGA AAAATCCATC
AGCGATCTGC AGCTGGGGCA GATTGATTTT GGGATAGACG GTATCGATTT GCAGCCCGAA
GCCAACTTTC GTATCGACAG CCTGCCGGAA GGCATTTGCC ATCAGACACT CTATCAGGAC
CAACAAATTT GTTTGGTACG CAAGGGCCAC CCGGCCATAG CGCTGCTTGG GGAAGGAAAG
TGGGACCTCA GCCGCTACCT GGAGTTGGCT CATGTGCAGG TACGCTGCGA AGGTAACGAT
TGGTGGGCGT TGGATTACTA TTTGGCGACC CAGGGTAAGC AGCGGCACCT ATGCGCTACC
GTGCCCGACT TTTATGGCGC CGCCAGCGTG TGCGCCAATA CCGACCTGGT GTTCACCCTG
CCTCAGAGCT TTGCGCGCCA TGCCTCCAAA CTCTACGCCT TGGAGATGCT GCCACTCCCC
TTTGACTTTA TGCCCCTGGC CTATGTGCTC TTGTGGCATC AACGAAATGA CGGCGATCCC
GGCCACAGAT GGATACGCGA GCTTATCACC CAAAGCGCCC GTAAAAGCTT TGGTGACAAA
CTCAAATGGA CGCAAGATTA A
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| Protein sequence | MQLDKLTRID LNLLVVLQVL LEEQSVTRAA VRLNLSQSAL SKSLSRLRET LGDPLFSRTA
HGLKPTAHAL ALAERLPGVL QALNQLVMPP SFDPASSTRT FSFAMVESAY ETLIPGFIGP
LLSMAPGLRL NSYVWNEKSI SDLQLGQIDF GIDGIDLQPE ANFRIDSLPE GICHQTLYQD
QQICLVRKGH PAIALLGEGK WDLSRYLELA HVQVRCEGND WWALDYYLAT QGKQRHLCAT
VPDFYGAASV CANTDLVFTL PQSFARHASK LYALEMLPLP FDFMPLAYVL LWHQRNDGDP
GHRWIRELIT QSARKSFGDK LKWTQD
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