| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3432 |
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| Symbol | |
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| ID | 4605679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4061772 |
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| End bp | 4062458 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782852 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_929304 |
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| Protein GI | 119776564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000345172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.351937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCACT TGTTGCTTGT TGATGACGAT CCAGGTTTGT CTGAGCTGTT AAAAGAATTA
CTGGAGCTGG AAGGCTTTGT CCTCACCCTC GCCCACGATG GCGCCGAAGG ACTCAGCAAG
GCCGTCAGCA GCCACTTTGA CCTCATTCTG CTGGATGTGA TGCTGCCTAA ATTGAATGGC
TTTGAAGTGC TTAAACAGCT GCGTAACCAC AAACAAACGC CGGTGCTTAT GCTCACCGCC
CGCGGTGATG ATATCGACCG GGTCGTGGGG CTTGAAATCG GCGCCGATGA CTATCTGCCC
AAGCCCTTCA ACGACCGCGA GTTGGTGGCC CGCATTCGTG CCATTTTGCG CCGGGCTCAG
CCGGGCACAC CACAGAGTCA GCCACCGGAA GAGATACAAC TTGGTGACCT GAAATTAGAT
CCCAGCCGCC AGGAAGCCTG GTGCGCCCAG AGCCTTATCA ATCTCACAGG TACCGAATTT
GCCCTGCTGC TGCAGCTGGC TTCACAGGCA GGCGAACTGG TGAGTAAAGA AACCCTGAGT
GAAACCGTGC TCGGCAAGCG CCTGATGCCC TTTGACCGCA GCCTGGATAT GCACCTGTCG
AACCTGCGCA AGAAGTTGCC CGAGCGCAGC GATGGTCGCC CCAGGGTAAA AACCATCCGT
GGTAAGGGAT ATATCTGGCT GAAATGA
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| Protein sequence | MNHLLLVDDD PGLSELLKEL LELEGFVLTL AHDGAEGLSK AVSSHFDLIL LDVMLPKLNG
FEVLKQLRNH KQTPVLMLTA RGDDIDRVVG LEIGADDYLP KPFNDRELVA RIRAILRRAQ
PGTPQSQPPE EIQLGDLKLD PSRQEAWCAQ SLINLTGTEF ALLLQLASQA GELVSKETLS
ETVLGKRLMP FDRSLDMHLS NLRKKLPERS DGRPRVKTIR GKGYIWLK
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