Gene Sama_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3425 
Symbol 
ID4605672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4055332 
End bp4055868 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content53% 
IMG OID639782845 
Producthypothetical protein 
Protein accessionYP_929297 
Protein GI119776557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.31492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCT TTACCCTTCT TGGCATGCTG GCCCTTAGCT TGAGTGTTCA GGCGAATGTC 
TATAAATGGG TCGACAAAGA CGGCAAGGTT CATTACAGCG ATAAACCCCA GCCCAACGCC
GAAGTTGTTG AGCTGAAAGA GACTTCCTCC AATCAAATTC GTTTGGACGT GCCCGCTGCC
ATTCCCAAGG CAGACACCAA AGTGGAAGCC ATCGAATACC AAGTATCCAT TCTGACCCCC
GAAGCCGACG AAACCATTCG CAATAACGAA GGCAAGTTTG AAGTCACGGC CACTGTCACC
CCCGAAAAGC CAGCCAACGC CCTGTGGGTG TTACGTATTG ACGGCAAGGT GTGGGGCGAT
GCGATGGACG TGCCGCTGTT TCGGGTCAGC GAACTGGACC GGGGTGAACA CAGCATTGAA
GTACAACTGA TTGCCAGAAA TGGCAAACCG ATTGCATCCA GTGGCAGTAG AACCCTGTTT
TTGCACCGTA CCACCCTGTT GCAGCAACCC AAGGCGGTTC CCATTTCGGG CAATTGA
 
Protein sequence
MRTFTLLGML ALSLSVQANV YKWVDKDGKV HYSDKPQPNA EVVELKETSS NQIRLDVPAA 
IPKADTKVEA IEYQVSILTP EADETIRNNE GKFEVTATVT PEKPANALWV LRIDGKVWGD
AMDVPLFRVS ELDRGEHSIE VQLIARNGKP IASSGSRTLF LHRTTLLQQP KAVPISGN