| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3423 |
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| Symbol | |
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| ID | 4605670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4053158 |
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| End bp | 4054705 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782843 |
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| Product | transporter |
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| Protein accession | YP_929295 |
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| Protein GI | 119776555 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.898769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAG GTACGGCGAC CCGGGAGGGA GGCCTCCTTG GCAAGTTTTT GAATGGCATC
GAGAAGGCCG GGAATAAGCT GCCGGATCCG GCAGTGATAT TTTTGCTGGC CATGGTGCTG
ATTTGGGGTC TGTCGGCGCT GTTTTCCCGC TTTGAGTTCA GCGCCATTGA CCCCCGCACC
GGCGAAGCCA TTGTGGTGCA TAACCTGCTG ACCGGTGATT CGCTGGCGGG CTTCCTCGCC
AATATGGTGA AAACATTCAC CTCGTTCGCG CCGCTGGGGG TGGTGCTGGT GGCCATGCTG
GGGGTTGGGG TGGCCGAGCA TTCGGGCTTT ATCAATACCG GCCTGAAGAT GATGCTCAAG
GTGACACCGG CCAGGCTGCT GACACCATCC ATCATACTGA TTGCCATCGT CAGCCACACT
GCGACGGATG CGGGCTATGT GCTGGTTATC CCGCTTGCCG GAGTGATTTT CTACGCCATG
GGTCGTCATC CACTGGCGGG CATTGCTGCG GCTTTTGCCG GGGTCTCCGG CGGTTTTGGC
GCCAACTTTG TGCCCTCGGG GCTGGATCCC TTGCTGCAAA GCTTTACCCA GAGCGCGGCG
CAAATCATCG ACCCGGAAAT CGCCATCAAC CCGCTGAATA ACTGGTTCTT TGCCTCGGCG
TCGAGCCTGC TGATTGTGCT GCTGGGCTGG TATCTCACCG ACAAGGTGAT TGAGCCGCGT
CTGGCGAATA CCCCAATCGA TGGAGATACT TCCAACCTAC CCAAGTTCGA CGAGGCTGGC
ACACGTGAGA AGCAGGGCTT TTTGCTGGCT GTAACCGTGA TGGTGGCTGG GCTGGTGCTC
CTGTATCTGG CGGCAAGCCC GGCGGATTCT CCGCTAAGGG CCAAGAGCGG TAATTTGTCT
GACTTCAGTG CGCCCCTGAT GCAATCGATA GTGCCGCTGA TTTTCCTGCT GTTTTGGATC
CCCGGCGCCG TGTACGGCTT CTATGTGGGC ACCTTCAAAA AGAGCAAGGA CATGATAGAT
GCCATGTCCA AGTCCATGGG CAGCATGGCC TATTACATAG TGATGGCCTT CTTCTGTGCC
CTGTTTATTG CGGCTTTCAG CCAGTCCAAT CTGGGGGCTT TGCTGGCCAT TGAAGGGGCC
GAGGTGCTTA AGGCGTTGGC ACTGCCAAGT GCGGTGACCA TTGTCGGCAT TATCTTCCTC
ACCGCCTTTG TGAACCTGTT TGTGGGCTCA AGCTCGGCCA AGTGGGCGCT GCTGGGGCCG
ATTTTTGTGC CCATGCTGAT GCAGCTGAAT ATCTCCCCCG ACCTGACCCA GGCGGCCTAC
CGGGTGGGCG ACTCAGGTTC CAACATCATC ACCCCGCTGA TGCCTTACTT CCCGCTGGTG
GTGGTGTATT GCCAGAAGTA TGTGAAAAAC ACCGGCATAG GTACCTTGAT TGCCATGATG
CTGCCGTTCT CGGTGGTGTT CCTGGTGGGC TGGACCGCCT TCCTGCTGCT GTACTGGACC
CTGGGCTTCC CGCTGGGCCT GCAGGCGAGC TACACCTACG GTCTGTAG
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| Protein sequence | METGTATREG GLLGKFLNGI EKAGNKLPDP AVIFLLAMVL IWGLSALFSR FEFSAIDPRT
GEAIVVHNLL TGDSLAGFLA NMVKTFTSFA PLGVVLVAML GVGVAEHSGF INTGLKMMLK
VTPARLLTPS IILIAIVSHT ATDAGYVLVI PLAGVIFYAM GRHPLAGIAA AFAGVSGGFG
ANFVPSGLDP LLQSFTQSAA QIIDPEIAIN PLNNWFFASA SSLLIVLLGW YLTDKVIEPR
LANTPIDGDT SNLPKFDEAG TREKQGFLLA VTVMVAGLVL LYLAASPADS PLRAKSGNLS
DFSAPLMQSI VPLIFLLFWI PGAVYGFYVG TFKKSKDMID AMSKSMGSMA YYIVMAFFCA
LFIAAFSQSN LGALLAIEGA EVLKALALPS AVTIVGIIFL TAFVNLFVGS SSAKWALLGP
IFVPMLMQLN ISPDLTQAAY RVGDSGSNII TPLMPYFPLV VVYCQKYVKN TGIGTLIAMM
LPFSVVFLVG WTAFLLLYWT LGFPLGLQAS YTYGL
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