| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3400 |
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| Symbol | |
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| ID | 4605647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4026959 |
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| End bp | 4028179 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782820 |
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| Product | trypsin-like serine protease |
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| Protein accession | YP_929272 |
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| Protein GI | 119776532 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTC TTTGTCTGGC ACTGGCGGTT GCGCTTTGTG CCAACCTTTC TGGGTGTGCC
AACACCCGAC TTAATGCCAA TAAATTGCCA AAAGGTGTGG CGGTCAACAA GTCCATCACC
CTGCCGGTAG ATGTCTCTGT GGCTTACTAC GTGCCCAAAA TTCAAATGGA CAGTCGTTTC
TATCTGGAGA AGTGGAATAT CTGGGTAGAG CCGGGCTCCG CCTTGTCGGA CGGTGTGCGT
GATGCCTTCA ATGCTTACTT CAGCAATGCC GTCCTGCTGG ACCGTGCAAG CGATGACGCC
GTTGGCCTGG TGATAGATCT GGATCCCGAA TGGGAGTTCG TCTCTGGCAA AGCCGTGATG
ACCTTGAGCT ACAAGGTGCT GAATGGTGGT GATAAACCGT TGAAAGAAGG TAAGAAAACC
TTTAAGGCCG ACATTGGCTA TGTGGGCGAC AACTCTGGCA TGTACAACGC GGCGATGCGG
GCAACCCAAC TGGTCATTGT AGACGTGCTC AATAGCCTCA AACCCACAGC GGCCGGGTAT
CCGGCGCAGC TGGCCATGAA GGCGACCAAC CCGCTACAAT TGGCCAACAT GGAGAAGCCA
GTGAGCAGTG GTACCGGGTT TTATATCAAT GAAACCGGAC AGTTACTGAC GGCTGCCCAT
GTGCTGCGGG AATGCATGGT CACCAAGGTG CAGACACCAA CTCAGTCTTA CGATGCCACT
GTGGATGCCA GCTCCACCCT TTTGGATCTG GCTGTGGTGA GTACAGGTGC GCCAGCTGAG
CGCTACTTGC CGCTGCGTAA GGGCAGTGAA ATCTTCCTCG GTGAAGCCGT GACCAACGTG
GGTTACCCCC TGCAGGGCCT GCTTGCGGCG TCGCCAAACC TGACCCGAGG TAACGTCAGC
TCCATGAATG CCCTCAAAGG TTCCGTTGGC CAGTTCCAGT TCTCGGCACC TATTCAGCCC
GGCTCCAGCG GGGGGCCCGT GGTATCAGAT GGTGGTGAAC TGCTGGGAGT GACAGTTGCC
ACGCTCAACG CAGCCAAGCT GATTGAATCC GGCGCCCTGC CACAGAATGT GAACTTTGCC
CTCGATGCCA GGCACGTTGC CCGATTCCTC GACAAGCATC AGGTGGCGTT TCATCAGGTA
GAGCCGAATC TGAAAGGGGA TATTCGTATC AGCAACGATG CGGCTTTGTC GTCTGTAGTG
CAGTTGGCCT GTTATCAATA A
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| Protein sequence | MRFLCLALAV ALCANLSGCA NTRLNANKLP KGVAVNKSIT LPVDVSVAYY VPKIQMDSRF
YLEKWNIWVE PGSALSDGVR DAFNAYFSNA VLLDRASDDA VGLVIDLDPE WEFVSGKAVM
TLSYKVLNGG DKPLKEGKKT FKADIGYVGD NSGMYNAAMR ATQLVIVDVL NSLKPTAAGY
PAQLAMKATN PLQLANMEKP VSSGTGFYIN ETGQLLTAAH VLRECMVTKV QTPTQSYDAT
VDASSTLLDL AVVSTGAPAE RYLPLRKGSE IFLGEAVTNV GYPLQGLLAA SPNLTRGNVS
SMNALKGSVG QFQFSAPIQP GSSGGPVVSD GGELLGVTVA TLNAAKLIES GALPQNVNFA
LDARHVARFL DKHQVAFHQV EPNLKGDIRI SNDAALSSVV QLACYQ
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