| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3362 |
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| Symbol | |
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| ID | 4605609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3989242 |
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| End bp | 3989934 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782782 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_929234 |
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| Protein GI | 119776494 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGAGA CTCTGAATAT GCGCCCTTAC CTGATTGCTC CTTCTATTCT GTCTGCCGAT
TTCGCCCGTT TGGGGGATGA CGTTAAAGCT GTATTGGATG CCGGTGCCGA TGTGGTTCAC
TTCGACGTGA TGGACAACCA CTATGTGCCT AATCTGACCA TTGGCCCCAT GGTGTGTAAA
GCGCTGCGTG ACTATGGTAT TACCGCCGAC ATCGACGTGC ATTTGATGGT TAAGCCGGTG
GACCGCATTA TTCCCGATTT CGCCAAGGCG GGAGCCTCTA TTATTACCTT CCATCCGGAG
GCCTCGGAGC ATGTTGATCG CACCCTGCAG CTTATTCGTG ACCACGGATG TAAGGCTGGA
CTGGTATTTA ATCCAGCCAC GCCGCTGCAC TACCTTGATT ATGTGATGGA TAAGCTGGAT
GTGATACTGC TGATGTCGGT CAACCCGGGC TTTGGGGGCC AGTCTTTTAT CCCTGCGACT
CTCGACAAGC TTAAGCAGGT TCGTGGGCGT ATCGATGCCA GTGGCTACGA TATTCGCCTC
GAAGTGGATG GCGGTGTGAA AGAAGATAAC ATTGCTGAAA TCGCGGCAGC CGGTGCCGAC
ATGTTTGTGG CAGGCAGTGC CATATTTGGC AAACCGGATT ACAAGGCCGT TGTTGACCGC
ATGCGTGCGG AGCTGGCCAA GGTAGCTGGC TGA
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| Protein sequence | MPETLNMRPY LIAPSILSAD FARLGDDVKA VLDAGADVVH FDVMDNHYVP NLTIGPMVCK
ALRDYGITAD IDVHLMVKPV DRIIPDFAKA GASIITFHPE ASEHVDRTLQ LIRDHGCKAG
LVFNPATPLH YLDYVMDKLD VILLMSVNPG FGGQSFIPAT LDKLKQVRGR IDASGYDIRL
EVDGGVKEDN IAEIAAAGAD MFVAGSAIFG KPDYKAVVDR MRAELAKVAG
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