| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3335 |
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| Symbol | potE |
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| ID | 4605582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3962848 |
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| End bp | 3964164 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782755 |
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| Product | putrescine transporter |
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| Protein accession | YP_929207 |
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| Protein GI | 119776467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT CAAACAACAA GATAGGCGTG GTTCAACTCA CCATTCTCAC CATAGTTAAC
ATGATGGGCT CAGGTATCAT CATGCTGCCG ACCCAGCTGG CACAGGTGGG GACCATTTCG
ATATTGTCCT GGCTGGTTAC GGCCGCAGGC TCAACGGCGC TGGCCTTCGC TTTTGCCAAG
TGCGGCATGT TCAGTAAAAA GTCCGGCGGC ATGGGCGGCT ACGCCGAATA CGCCTTCGGC
CGCAGCGGTA ACTTTATGGC CAACTACACC TATGCGGTGT CGTTGCTGAT TGCCAACGTG
GCCATTGCCA TCTCGGCGGT GGGCTATGGT GCCGTGCTCT TTGACGTGGA GCTGAGCCCC
ATCGCCACCT GTCTGGCCAC CATAGGTGTA CTGTGGCTCG CCACGGTCGC CAACTTTGGG
GGTGCCCGCA TCACGGGTCA GGTGTCCAGC ATCACTGTGT GGGGCATCAT TCTGCCGGTG
ATTGGGGTGT CGCTTATCGG TTGGTTCTGG TTTGACTTTG ACCTCTACAA GTCAGCCTGG
AATCCACACG ATCTGCCCTT CTTCGAAGCG CTGGGCGGCT CCATCGCCAT GACCCTGTGG
GCCTTCCTGG GCCTGGAATC TGCCTGTGCC AACTCAGAAG CGGTTGAAAA CCCAGAGAAG
AACGTTCCTA TCGCGGTTAT GGGCGGCACC CTGGGCGCGG CACTGATTTA TATCGTGTCC
ACCAACGTGA TTGCCGGTAT TGTGCCAAAC GGTGAGCTGG CGCTGTCCAA CGCGCCTTTC
GGTCTGGCCT TTGCCCAGAT GTTCAACCCC ACCATTGGTG CCATCGTCAT GGCCTGCGCC
ATCATCAGCT GTACCGGCTC GCTGCTGGGC TGGCAGTTCA CCATTGCACA GGTGTTCAAG
GCCTCTGCTG ACGAAGGCTT CTTCCCCAAA CTCTTCTCCA AGGTGACCAA GGCCGACGCC
CCCGTGCTGG GCATGCTGGC GATAGTTTCA ATCCAGTCTG TGCTAAGCCT GATGACCATC
AGCCCCTCGC TGAACAAGCA ATTTGAAGCC CTGGTAAACC TGGCAGTGGT GACCAACATC
ATCCCTTACA TCCTGTCTAT GGCCGCCCTC GGCGTGATGC AAAAGCAGAT GAAGATCCCG
GTCAGCAAGG CCCGCATCGC CAACTGCATG GCAGTAATGG GCGCGCTCTA CAGCTTCTAT
GCCCTGTACA GCTCGGGCGA GACCGCCGTG ATGCTGGGCT CCATTGCCAC CTTCTTCGGC
TGGACCCTGT ATGGCGTGAT CTCCAAGAAA AACGAACTGC GCCTGCAACA GGCCTGA
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| Protein sequence | MSKSNNKIGV VQLTILTIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAFAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYG AVLFDVELSP
IATCLATIGV LWLATVANFG GARITGQVSS ITVWGIILPV IGVSLIGWFW FDFDLYKSAW
NPHDLPFFEA LGGSIAMTLW AFLGLESACA NSEAVENPEK NVPIAVMGGT LGAALIYIVS
TNVIAGIVPN GELALSNAPF GLAFAQMFNP TIGAIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK LFSKVTKADA PVLGMLAIVS IQSVLSLMTI SPSLNKQFEA LVNLAVVTNI
IPYILSMAAL GVMQKQMKIP VSKARIANCM AVMGALYSFY ALYSSGETAV MLGSIATFFG
WTLYGVISKK NELRLQQA
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