| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3334 |
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| Symbol | |
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| ID | 4605581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3960625 |
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| End bp | 3962787 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782754 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_929206 |
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| Protein GI | 119776466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGT TAAAAATTGC CGCCAGTTTA TCTGTTCGCG CCTGTTTTGA TACCAAACGG
GAAGTCGTCA ACGTATTAAC CACTGACTTT TGCGATGTGG GTGCCGCCGT TGTTTCTGTT
ACTGATGTAA ATAACGGCAT TGTCGACAAA ATTAAAAATA CCGGTTTGAA TTTACCGATA
TTTGTTTCTG TATGCTGTGA AGAAGCTTTC CCCGATGATT TTTGCGATAC CATCACCGGG
GTATTCGAAC TCTGTAATGC CAAAACTGAC TTTTATGGCA AACAGGTCGA AACCGCGGTG
CGTCGCTATC AGGAATCCCT GCTGCCCCCC TTCTTCGGTA CCCTGAAAAA GTACGTTGAA
ATGGGTAACT CCACCTTTGC CTGTCCGGGG CACCAGGGTG GTCAGTTCTT CCGTAAACAC
CCCGTTGGCC GTCAGTTCTT TGATTTCTTC GGCGAAACTG TGTTCCGCTC GGACATGTGC
AATGCCGACG TGAAGCTGGG TGACCTGCTC ATACACGAAG GCGCACCCCA CGATGCCCAA
GCCTATGCGG CCAAGGTGTA TAACGCCGAC AAAACCTACT TTGTACTGAA CGGCACTTCC
GCCTCCAACA AGGTGGTGTG TAACGCCCTG CTCGCCCCCG GCGATCTGGT ACTGTTTGAC
CGCAACAACC ACAAATCCAA CCACCACGGC GCCCTCATTC AGGCCGGTGC CACTCCCGTG
TATCTGGAAA CGGCCCGCAA CCCCTTCGGT TTTATCGGTG GTATAGACTC CCACTGCTTT
GATGAAGCTT ACCTGCGGGA CGAAATCGGT AAGGTTGCCC CTGAGCGGGT ACAGGCAGCG
CGCCCATTCC GCCTTGCCAT CATCCAGCTT GGCACCTATG ACGGCACCAT ATACAACGCC
CGTCAGGTGG TGGACCGCAT TGGCCACCTG TGTGACTACA TCCTGTTTGA CTCTGCCTGG
GTAGGCTACG AGCAATTCAT CCCCATGATG AAAGACTGCT CGCCGCTGCT GCTGGAACTC
GGCGCCGAAG ACCCGGGTAT TATCGTCACC CAGTCGGTGC ACAAACAGCA GGCCGGGTTT
TCGCAAACCT CACAAATCCA CAAAAAAGAC AGCCATATCA AGGGACAGGA ACGCTACTGC
AACCATAAAC GCTTTAACAA CGCCTTTATG ATGCACGCCT CCACCAGCCC CTTCTATCCG
CTGTTTGCAG CACTGGATGT GAACGCCAAG ATGCACGAAG GCGCCAGCGG CCGTTACCTG
TGGCGCGAGG CAGTGAAGGC CGGTATCGAA GCCCGCAAGT TGCTGCTTAA AAAGTGCAAG
TACATCAAGC CCTTTATCCC CACCACAGTG GAAGGCGAGC CCTGGCAGAG CTTTGATACC
GAGCGAATGG CCGACGATCT GCGCTTCTTC GAGTTCGAAC CGGGCCTTAA ATGGCACGCG
TTCGATGGCT ACGAGAAGGG CCAGTATTTT GTCGACCCCT GTAAGTTCCT GCTCACCACC
CCCGGCATCA ACGCCGAAAC CGGCGAGTAC GAAGACTTCG GTATCCCGGC CACCATCCTT
GCAAACTTCC TTCGTGAAAA CAACATCATA CCGGAGAAGT GCGACCTTAA CTCCATCCTG
TTCCTCATGA CCCCCGCCGA GGACATGGCC AAGATGCAGC ATCTGGTGAC CCAGATTGCC
CGCTTCGAGA AGCTGATTGA CGAAGATGCA CCTTTAAGTG AAGTGCTGCC CAACGTCTAT
CGCACCAATC GCGAGCGTTA TGAAGGCTAC AGCATCCGTC GCCTGTGTCA GGAAATGCAC
GACCTCTATG TCAGCCGTAA CGTGAAACAG CTGCAAAAAG AGATGTTCCG TGCTGCCCAT
TTTCCCAAGG CGGTGATGAA TCCACAGGAC GCCAATATCG CCTTTGTGCG CGGCAAGGCC
GAGCTGGTGC CCCTCAGTGA AATCGAAGGC CAGATCGCGG CCGAAGGCGC CCTGCCTTAT
CCACCCGGCG TGCTCTGTAT GGTGCCGGGG GAAGTCTGGG GCGGCGCGGT GCAGCGCTAT
TTCCTGGCCC TCGAAGAAGG CATCAACCTG CTGCCGGGCT TCGCCCCCGA ACTGCAGGGT
GTGTACCTGG AGCGCGCCGA TAATGGCCGG GTTCAGGCTA TGGGTTACGT CCTCAAACGC
TGA
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| Protein sequence | MNSLKIAASL SVRACFDTKR EVVNVLTTDF CDVGAAVVSV TDVNNGIVDK IKNTGLNLPI
FVSVCCEEAF PDDFCDTITG VFELCNAKTD FYGKQVETAV RRYQESLLPP FFGTLKKYVE
MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETVFRSDMC NADVKLGDLL IHEGAPHDAQ
AYAAKVYNAD KTYFVLNGTS ASNKVVCNAL LAPGDLVLFD RNNHKSNHHG ALIQAGATPV
YLETARNPFG FIGGIDSHCF DEAYLRDEIG KVAPERVQAA RPFRLAIIQL GTYDGTIYNA
RQVVDRIGHL CDYILFDSAW VGYEQFIPMM KDCSPLLLEL GAEDPGIIVT QSVHKQQAGF
SQTSQIHKKD SHIKGQERYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL
WREAVKAGIE ARKLLLKKCK YIKPFIPTTV EGEPWQSFDT ERMADDLRFF EFEPGLKWHA
FDGYEKGQYF VDPCKFLLTT PGINAETGEY EDFGIPATIL ANFLRENNII PEKCDLNSIL
FLMTPAEDMA KMQHLVTQIA RFEKLIDEDA PLSEVLPNVY RTNRERYEGY SIRRLCQEMH
DLYVSRNVKQ LQKEMFRAAH FPKAVMNPQD ANIAFVRGKA ELVPLSEIEG QIAAEGALPY
PPGVLCMVPG EVWGGAVQRY FLALEEGINL LPGFAPELQG VYLERADNGR VQAMGYVLKR
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