Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3291 |
Symbol | |
ID | 4605538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3910837 |
End bp | 3911778 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782711 |
Product | putative acyltransferase |
Protein accession | YP_929163 |
Protein GI | 119776423 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.497498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAACT TTTTGCCGGG GCCGCTGCTG TTTTTCATAA GCGGTAGCTT GCTCATTATC AACACCGCCA TCTGTGGTTC CCTGGTGTGC ATCGGTGGTC TGTTCAAACT GCTGACGCCC TTCAAGGCGG GCCGTGTCCG GGTCACCATG CTGATGAACC GTTTTATGTG GCTTTGGGCC ACTCTCAACG GCGCCATCCT CAAGCTGATT GCCAAAATCG AATGGGACGT CAAAGGTCTG GAACAGCTGG ATAAAAACGG CTGGTATCTG GTGATAAGCA ACCACTTGAG CGGCTTCGAC ATTGCGGCGC AGACCTATAT CCTTCGGAAC CACATTCCCA TGCTCAAGTT CTTTCTCAAA AAAGAACTGA TTTATGTGCC CATCATGGGG CTGGGCTGCT GGGCGCTGGA CATGCCTTTT ATGAACCGTA CCAGCCCCGA GAAGCTGAAA AAGAATCCCA AGCTCAAGGG CAAGGATCTG GAAACGACCC GCAAGGCGTG CGAAAAATTC CGCGATCTGC CCACTTCCAT CATCAACTAT GTGGAAGGCA GCCGCTTTAC CGAAGAAAAG CGCGACCGGC AAAACTCGCC CTATCGCTAC CTGCTGCGCC CCAAAGCAGG CGGTATCGCG TTCGCACTTT CTGCCATGGG TGAGCAGTTC AGCCACCTCT TGAACGTCAC CGTGGTTTAC CCGGATGCCC CAAAAGACAT TCTAGCCGGC GTAATGCAGG GCAAGGTGAG TAAAATTGTT ATCAGAATAG AAGCACTGCC GGTGCCCGAA GTGGATGACA AACAGTACTT CAGCAGCGCC GAATACCGGG CCCAATTCCA GCGTTGGCTC AATGACATCT GGCTGCAAAA GGATGAACAA ATCCACGAGC TACTGGCCGA GCACAAAGCC AGCACCAGCA GCTACCGTGA ACTGGCCGAG CGTGGCCACT GA
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Protein sequence | MLNFLPGPLL FFISGSLLII NTAICGSLVC IGGLFKLLTP FKAGRVRVTM LMNRFMWLWA TLNGAILKLI AKIEWDVKGL EQLDKNGWYL VISNHLSGFD IAAQTYILRN HIPMLKFFLK KELIYVPIMG LGCWALDMPF MNRTSPEKLK KNPKLKGKDL ETTRKACEKF RDLPTSIINY VEGSRFTEEK RDRQNSPYRY LLRPKAGGIA FALSAMGEQF SHLLNVTVVY PDAPKDILAG VMQGKVSKIV IRIEALPVPE VDDKQYFSSA EYRAQFQRWL NDIWLQKDEQ IHELLAEHKA STSSYRELAE RGH
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